Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dadantii 3937

 Score =  108 bits (271), Expect = 2e-28
 Identities = 94/345 (27%), Positives = 161/345 (46%), Gaps = 22/345 (6%)

Query: 25  LLAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTDIA 84
           LL+GC +A    APAP        +  S     L+  G +R A+   L FR+ GR+   A
Sbjct: 38  LLSGCNDASNEPAPAPPRPVRTVTVEPSATGEVLSQVGEIRPAEETALGFRLDGRVVSRA 97

Query: 85  VKEGDQVKKGQLLASLDSRDAKTALEAAQLEL-------KNTEQEYRRAKAIFEKTQAIS 137
           V  G  VK G+++A+LD+RD++  L++A+ +L       +  EQ   R K +     AI+
Sbjct: 98  VDVGTVVKAGEVIATLDTRDSENQLQSAKADLTRAAASERLAEQNLNRMKQL-APNGAIA 156

Query: 138 KAELDKVTNRY-------DLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQ 190
           +++LD+  + +       + A+  V+ A+ +LEYT+++AP  GVI+  +      V A Q
Sbjct: 157 RSQLDEAQSNWASAVSVRESAQASVKSAQDRLEYTRLSAPVAGVITAVSANPGQVVNAGQ 216

Query: 191 VIMILQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSSDSQT 250
            ++ L           +  R++ SG+ +      L + P  +    +R  S    ++++T
Sbjct: 217 EVVRLATFAGRGAVFNVSERLITSGLTDPLVTVSLLSNPAIKTQGHVRDVSPLADAETRT 276

Query: 251 YSVVLGFEDLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQGKQFVWVVNAQ 310
           + V +   +     V   + A V      P    T I LP +AL         V+VV+ Q
Sbjct: 277 WRVRVSLIEPPKEMV---LGATVQGEVTLPG--GTAIALPASALTRQGDNPA-VFVVDPQ 330

Query: 311 NQAEKRYVDIGTTYKD-RVVITQHLKPGEQVIIAGVSSVREGMTV 354
            Q  +        Y D ++V+   L  G++V+ AGVS +R G  V
Sbjct: 331 TQTLRLQPITLRHYSDSQIVVADGLSTGDKVVTAGVSKLRAGEKV 375