Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., efflux RND transporter periplasmic adaptor subunit from Bacteroides stercoris CC31F

 Score =  117 bits (292), Expect = 6e-31
 Identities = 88/335 (26%), Positives = 163/335 (48%), Gaps = 9/335 (2%)

Query: 23  ALLLAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTD 82
           ALL   CG     +     +  + +++ A  +  +  F  + R  + ++L+FR+ G +  
Sbjct: 14  ALLFHACGGKD--TQDKQELSVSTSQVTALPQNGNKEFPFIARPFRTSELSFRVGGPIDR 71

Query: 83  IAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELD 142
             V  G++ ++G ++A +D RD +   + A+   + ++ E+ R +A++ K + IS +  +
Sbjct: 72  FDVYAGNRYERGNIIAEIDPRDFRIRKKRAEAVYRQSKAEFERIEALYRK-ENISASTYE 130

Query: 143 KVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQDLNDLE 202
           K    Y  AK   + A  +LE T++TAPF G + E  IE F  V+A Q ++ L D++ L 
Sbjct: 131 KAKADYISAKTAFDTAVCELEDTRLTAPFTGYVGEVYIEKFQDVKATQPVVSLIDIHQLR 190

Query: 203 VAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSSDSQTYSVVLGFEDLKG 262
           + I +P  +  +   +        AIP Q +  K+   S   + ++ +Y ++      +G
Sbjct: 191 IEIYVPQEIAYAAQSSDSIRICFDAIPGQTYRAKVIEVSKGTTRNNLSY-LLTAILPNEG 249

Query: 263 FRVMPGMSAKVIPVADKPADENTL-ITLPLTALVPDNQGKQFVWVVN-AQNQAEKRYVDI 320
            +++ GMS K I   D P  E+     +   AL        +VWVVN A +Q  +R V +
Sbjct: 250 GKLLGGMSGKAI--LDTPQAESAAGFCISQAALCHRPSTGDYVWVVNPATSQVSRRKVTV 307

Query: 321 GTTYKDRVV-ITQHLKPGEQVIIAGVSSVREGMTV 354
                D +V I   L+ GE +  +G+  + +GM V
Sbjct: 308 AKLLPDGLVQIADGLQIGETLATSGLRFLSDGMKV 342