Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., Toluene efflux pump periplasmic linker protein TtgG precursor from Alteromonas macleodii MIT1002

 Score =  138 bits (347), Expect = 3e-37
 Identities = 101/360 (28%), Positives = 174/360 (48%), Gaps = 13/360 (3%)

Query: 8   SMAAKRSLLSAVIASALLLAGCGEAPQISAPAPVVKPALTEIVASQRASDL---TFNGVV 64
           SM     +L   + S   L+ C         A V  P   ++       D    TF  VV
Sbjct: 2   SMMRFSHILFLSVLSVSTLSACSSEEPAEQQANVA-PRYVKLATVSNIPDFDEFTFPAVV 60

Query: 65  RAAQRADLAFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYR 124
            A +  DL+F +SGRL    +  G  + KG+LLA++D +  +  ++ +   L   ++E  
Sbjct: 61  SAVKTVDLSFEVSGRLIQTDLVTGSDINKGKLLATIDRKPFERRVDESTTRLDQAKRELD 120

Query: 125 RAKAIFEKTQAISKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFA 184
           R + +F + + ++++ LD     Y+LA   ++ A++ L YTQ+ APFD  +S++ +EN +
Sbjct: 121 RIEKMFAQ-KLVAQSSLDTAKTSYELAVIDLKNAEQDLSYTQLYAPFDAKVSQRLVENNS 179

Query: 185 QVQANQVIMILQDLNDLEVAIEIPHRVMLSGVRN--TRAIAELSAIPNQQFDLKLRTYST 242
            V A   I  LQD++ +   I +P R++ + +     +A A L+   +Q + +    +ST
Sbjct: 180 FVAAGTPIARLQDVSKIYFNINVPERLLTANIGRGIKQASATLATNRSQWYPVNYVEHST 239

Query: 243 QPSSDSQTYSVVLGFEDLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQGKQ 302
           QP   SQTY VV   E  +   + PG  A V+ V+ + +       +P+ ALV D     
Sbjct: 240 QPDPVSQTYEVVFAMEPREELPLTPGARA-VVKVSLQGSLYPEGFVVPVRALVGDKDSGF 298

Query: 303 FVWVVNAQ-NQAEKRYVDIGTTYKDRVVI----TQHLKPGEQVIIAGVSSVREGMTVRPY 357
            VWV N + +   K+ V++     +  +I       +  G+QV+ AG + +R  M V PY
Sbjct: 299 AVWVYNDETSSVAKQAVNVKHIENELAIIEGKSQGEITLGQQVVAAGATQMRADMKVLPY 358