Pairwise Alignments

Query, 192 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., membrane integrity-associated transporter subunit PqiC from Erwinia tracheiphila SCR3

 Score = 86.7 bits (213), Expect = 3e-22
 Identities = 57/188 (30%), Positives = 102/188 (54%), Gaps = 12/188 (6%)

Query: 1   MKPWLLMMLTTLLVGCGGTPQPKVSFYLLPNNPE---LSEHIQPKTLPLLVVQPVELAAY 57
           M  W+ + LT +L  C    +P+ ++Y LP+  +   +S  +  +  P + VQ + +  +
Sbjct: 1   MIKWIPVALTLILTACSS--KPETTWYQLPSAHKGGAVSNSVTQR--PAVFVQHISVPDF 56

Query: 58  LDTQGIVYRQSETQVIQARQNQWAQRLSPQLTQRITNDLRRKQSRYWPAPLNASSIQQEH 117
           L   G+VY+ S+ + + A  N WA  L  QL Q +  +L  +   +    ++ S + Q+ 
Sbjct: 57  LAGNGLVYQSSDVKYVIASNNLWASPLDQQLQQTLIANLSGELPSWL---VSGSPLIQQQ 113

Query: 118 WKLQVRLQRFNGVYTGNAEVAGNWELLNPKGESMLNQEFSFQVPLKDTGYPALVEALSAG 177
             L V +  F+G Y G+A ++G+W LL  +G+ ++ + F   VPL++ GY ALV +L+AG
Sbjct: 114 DTLNVNISDFHGRYDGHAVISGDW-LLEHQGQ-IIKRSFILTVPLREDGYDALVRSLAAG 171

Query: 178 VDQLSTQI 185
             Q + QI
Sbjct: 172 WQQEAQQI 179