Pairwise Alignments

Query, 434 a.a., paraquat-inducible protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  162 bits (409), Expect = 2e-44
 Identities = 108/413 (26%), Positives = 196/413 (47%), Gaps = 31/413 (7%)

Query: 13  CDECGLITNVPLLSQAQTAQCPRCGHTLTQTPQKPYQTAVALTISCLILLVLSLTFPFMS 72
           C +C ++ ++P ++  Q+A CPRC   +            A+  + L+L+  +   P + 
Sbjct: 31  CPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLH 90

Query: 73  FSVQGMTQEITLLNAAKMLGEFQNVLLAILLFTTVILFPALYITILLFVSFKAAQSTQRQ 132
             + G+  +  ++     + +  + +   ++F  VI  P + +T + ++ F        +
Sbjct: 91  IWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLR 150

Query: 133 LSSSEIQRAKLLCKTLLTVQPWLMVDVFLIGVLVSLIKIASLAEVAMGYSFWAFCFFAML 192
                ++R K           W+M+D++L+G+ V+ IK+   A +  G   ++F    +L
Sbjct: 151 PVLLMLERLK----------EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVIL 200

Query: 193 VVKTVSLVDRYWLWQHFIPAQTPQGVNAGQTHCTHNSVSCHTCQQINLLRPDQKKPTCLR 252
              T+S ++   LW+ F P          Q   T        C   +      ++  C R
Sbjct: 201 TTVTLSHLNVEELWERFYP----------QRPATRRDEKLRVCLGCHFTGYPDQRGRCPR 250

Query: 253 CGS--RLHAYHPQLNLQWAWALLLAAIIFYIPANLYPMMYTVSLGKSEGSSIMQGVILLW 310
           C    RL   H   +LQ  WA LLA+I+  +PANL P+      G  +  +I+ G++ L 
Sbjct: 251 CHIPLRLRRRH---SLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLA 307

Query: 311 HLGSYPVAMVIFLASIFIPMAKMFALGWLYWQAGKLNVFPEQQNLK-RLKVYRVTEFIGR 369
              +  VA ++F+ASI +P  K+  +  L         F  QQ L+ R+ + R+  +IGR
Sbjct: 308 S-SNIAVAGIVFIASILVPFTKVIVMFTLLLSIH----FKCQQGLRTRILLLRMVTWIGR 362

Query: 370 WSMIDIFVVAILVSLVQLHNLMAIYPGPAALSFAAVVLLTMLSAMVFDSRILW 422
           WSM+D+FV+++ +SL+    ++A   GPAA  F A V+LT+L+    DSR+LW
Sbjct: 363 WSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLW 415