Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  159 bits (401), Expect = 2e-43
 Identities = 90/246 (36%), Positives = 134/246 (54%), Gaps = 2/246 (0%)

Query: 309 LLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFVSMSGKVVWVIGILVGL-SQIGL 367
           LL LL    G  +   V         +R + L    F+S    +V  + +LV + S IG+
Sbjct: 31  LLALLTLAVGWWIINKVSARLGKLVGLRNADLALQGFISTLANIVLKVLLLVSVASMIGI 90

Query: 368 NLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLV 427
                +   G AG+ IG ALQ +L+NFA G+++L++RPF +GD++ A GV G V  + + 
Sbjct: 91  ETTSFVAAIGAAGLAIGLALQGSLANFAGGVLILMFRPFRIGDWIEAQGVAGTVDSIQIF 150

Query: 428 NTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYSDDLLKAEAVLTDIVKS 487
           +T +RT DN+ +I+PN  +   +I N   +  R+V    G+ Y  DL KA  VL ++ K 
Sbjct: 151 HTVLRTGDNKTVIMPNGSLSNGIITNTNRQPTRKVVFDVGVDYEADLQKARNVLLELAKD 210

Query: 488 HPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDVYWDVTKEVKLRFDREGISIPFP 547
            P VL+ P P   V TL  SSI   +R W KT DYWDV + + +  + R   EGI IPFP
Sbjct: 211 -PRVLQDPAPQAVVSTLGDSSITVSLRLWTKTSDYWDVMFMLNEYARDRLKAEGIDIPFP 269

Query: 548 QQDVHL 553
           Q+ + +
Sbjct: 270 QRVIRV 275