Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., mechanosensitive channel (NCBI) from Escherichia coli BW25113

 Score =  179 bits (454), Expect = 1e-49
 Identities = 95/273 (34%), Positives = 156/273 (57%), Gaps = 3/273 (1%)

Query: 288 NSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNI--RISHLMQDFF 345
           N   +WL +N    L      +  L     G  + R ++ +AVN   I  +I   + DF 
Sbjct: 11  NGAGSWLVANQALLLSYAVNIVAALAIIIVGLIIAR-MISNAVNRLMISRKIDATVADFL 69

Query: 346 VSMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRP 405
            ++    +    ++  L ++G+  A V+   G AG+ +G ALQ +LSN AAG++L+++RP
Sbjct: 70  SALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRP 129

Query: 406 FDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMV 465
           F  G++V  GGV G V  + + +TT+RT D +II++PN KI    I N + E +RR + +
Sbjct: 130 FRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFI 189

Query: 466 FGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDV 525
            G+ Y  D+ + + +LT+I++S   +LK  E  ++++ L  SSI+F+VR W  + D  +V
Sbjct: 190 IGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNV 249

Query: 526 YWDVTKEVKLRFDREGISIPFPQQDVHLHLVDQ 558
           YWDV + +K  FD  GIS P+PQ DV+   V +
Sbjct: 250 YWDVLERIKREFDAAGISFPYPQMDVNFKRVKE 282