Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 1120 a.a., fused conserved protein (NCBI) from Escherichia coli BW25113

 Score = 86.7 bits (213), Expect = 5e-21
 Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 2/205 (0%)

Query: 352  VVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDF 411
            ++  +G +     +G++   +        V +GF LQ+   NF +G+++L  RP  +GD 
Sbjct: 892  IIIAVGAMTVFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDT 951

Query: 412  VHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVT-HERIRRVDMVFGIGY 470
            V  G   G VS + +  TTI  FD + +I+PN     + + N +  +   R+ +  G+ Y
Sbjct: 952  VTIGSFSGTVSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAY 1011

Query: 471  SDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVK-TDDYWDVYWDV 529
              DL K   VL      HP V+  P P +       S++D  +R +V+   D      ++
Sbjct: 1012 GSDLEKVRKVLLKAATEHPRVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDEL 1071

Query: 530  TKEVKLRFDREGISIPFPQQDVHLH 554
             + +        I+I F Q +VHLH
Sbjct: 1072 NRTIDQLCRENDINIAFNQLEVHLH 1096



 Score = 29.3 bits (64), Expect = 9e-04
 Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 44/229 (19%)

Query: 23  TSQENTQIETTTEITTTAESPSELENEIDQIKQYISELSVTLKQATGDVRDALQLQLFQK 82
           T+QE    +    I        ELE     I Q +S+  +T  +           QL Q+
Sbjct: 268 TAQEAVSPDEAARIQANPLVKQELE-----INQQLSQRLITATENGN--------QLMQQ 314

Query: 83  NAELRKSLSKAVEEKTIAKEKLVELVNIQQRYTEEANHYISERLNSLDDSLGKASHEEKL 142
           N +++  L +A++ +   KE++  L         + +  +S  L     +L  A   E +
Sbjct: 315 NIKVKNWLERALQSERNIKEQIAVL---------KGSLLLSRILYQQQQTLPSADELENM 365

Query: 143 -SYITTYR----ELQQYLDVTYHSSAENIGWLSSLDI-DTRDVEKTLRERINQRLRLLSA 196
            + I   R    E+ Q  D  + S A    +++ L+   T +V   + + + Q + +   
Sbjct: 366 TNRIADLRLEQFEVNQQRDALFQSDA----FVNKLEEGHTNEVNSEVHDALLQVVDMRRE 421

Query: 197 SLEYLKQQISVINNQIKSSPESEKANLQLALLFTQQRLDIVTKSLRSVV 245
            L+ L +Q   + NQ+  +      NLQ+     QQ+L  V+K+L+S++
Sbjct: 422 LLDQLNKQ---LGNQLMMA-----INLQI----NQQQLMSVSKNLKSIL 458