Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., Small-conductance mechanosensitive channel from Enterobacter asburiae PDN3

 Score =  177 bits (448), Expect = 6e-49
 Identities = 92/273 (33%), Positives = 157/273 (57%), Gaps = 3/273 (1%)

Query: 288 NSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNI--RISHLMQDFF 345
           N+  NWL  N    L    + ++  +A      +   +V +AVN   +   I   + DF 
Sbjct: 11  NNAGNWLVRNQAL-LLSYAVNIVAAIAIIIIGMIVARIVSNAVNRVMLARHIDATVADFL 69

Query: 346 VSMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRP 405
            ++    +    ++  L ++G+  A V+   G AG+ IG ALQ +LSN AAG++L+ +RP
Sbjct: 70  SALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAIGLALQGSLSNLAAGVLLVTFRP 129

Query: 406 FDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMV 465
           F  G++V  GG+ G V  + + +TT+RT D +I++VPN KI    I N + E +RR +++
Sbjct: 130 FRSGEYVDLGGIAGTVLQVQIFSTTMRTVDGRIVVVPNGKIIAGNIINFSREPVRRNELI 189

Query: 466 FGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDV 525
             + Y  D+ + ++++++I+ S   +LK  E  ++++ L  SSI+F+VR W K+ D  +V
Sbjct: 190 ISVAYDSDIDQVKSLISNIIASDDRILKDKEQTVRLNELGASSINFVVRIWSKSSDLQNV 249

Query: 526 YWDVTKEVKLRFDREGISIPFPQQDVHLHLVDQ 558
           YWDV + +K  FD  GIS P+PQ DV++  V +
Sbjct: 250 YWDVLERIKRDFDANGISFPYPQMDVNVKKVKE 282