Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., small-conductance mechanosensitive channel MscS from Dickeya dianthicola ME23

 Score =  156 bits (394), Expect = 1e-42
 Identities = 86/268 (32%), Positives = 146/268 (54%), Gaps = 5/268 (1%)

Query: 290 LVNWLASNA---VQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFV 346
           L +WL +N    +Q+   +   L+IL      A++    +   + ++ I ++  + DF  
Sbjct: 13  LQSWLVNNQHILLQYAVNIVASLVILCVGMIVARIMSNTMSRLMVARGIDVT--VADFLS 70

Query: 347 SMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPF 406
           ++    +    ++  LS++G+    V+   G AG+ +G ALQ +LSNFAAG++L+++RPF
Sbjct: 71  ALVRYGIIAFTLIAALSRVGVQTTSVIAVLGAAGLAVGLALQGSLSNFAAGVLLVVFRPF 130

Query: 407 DVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVF 466
             G+ V  GGV G V+ + + +TT+ T D ++I+VPN KI    I N + E   R +++ 
Sbjct: 131 RTGESVDLGGVAGTVTQVQIFSTTLLTADGKVIVVPNGKIIAGNIINSSREPDCRTEIIV 190

Query: 467 GIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDVY 526
           G+ Y  D+   + VL DIV +   +       I+++ +  SS++F+VR W    D   V 
Sbjct: 191 GVAYDADIDVVKKVLGDIVAADTRIQHDKGVTIRLNEMGASSLNFVVRLWSANGDAAAVN 250

Query: 527 WDVTKEVKLRFDREGISIPFPQQDVHLH 554
           WD+ +  K   D   I IP+PQ DVHLH
Sbjct: 251 WDLLESFKRALDEHRIGIPYPQMDVHLH 278