Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Small-conductance mechanosensitive channel from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  106 bits (265), Expect = 1e-27
 Identities = 71/277 (25%), Positives = 138/277 (49%), Gaps = 21/277 (7%)

Query: 278 VVFSIVRHWSNSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRI 337
           ++ S+   W N L      +    +  + +  +  + A+   ++TR+ +R+       R 
Sbjct: 9   ILSSLRESWQNFL-----ESVPSIILGILVITIGYIIARRIGEITRSKIRN-------RS 56

Query: 338 SHLMQDFFVSMSGKVVWVIGILV---GLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNF 394
           S  +   F+  + K+ + +  ++    ++ +G     +L+  G + +IIGFA +D   NF
Sbjct: 57  SDPLMSRFLGNTVKICFFLLTIIYAMNIAGLGEITTFLLSSIGASAIIIGFAFKDIGENF 116

Query: 395 AAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNV 454
            +G++L   RPF+V D V  G + GK+  +    T ++TFD + + +PNS +    + N 
Sbjct: 117 ISGIILAFNRPFNVNDTVEVGDLFGKIKSLEFRYTKLKTFDGKDVYIPNSDVLKKPVINY 176

Query: 455 THERIRRVDMVFGIGYSDDLLKAEAVLTDIVKSHPAVLK--TPEPNIKVHTLNTSSIDFI 512
           T +   R D + GI Y D++ +A+ V+ + V SHP++++    E  +    L TS+++  
Sbjct: 177 TEDGFFRWDFIVGIAYEDNIEQAKKVILETVNSHPSIIQDAVHENYVAEDQLATSTVNLK 236

Query: 513 VRPWVKTDDYWD----VYWDVTKEVKLRFDREGISIP 545
           V  WV T ++      V  +V K+VK   +  G S+P
Sbjct: 237 VFFWVDTYEFRREAVMVKGEVIKQVKEALEANGFSMP 273