Pairwise Alignments
Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056
Subject, 330 a.a., Small-conductance mechanosensitive channel from Acinetobacter radioresistens SK82
Score = 105 bits (261), Expect = 4e-27
Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 4/205 (1%)
Query: 357 GILVGL--SQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHA 414
G+L+ L S G +++ GI V IGFA +D N +G+++L+ PF +GD +
Sbjct: 109 GLLIALVISVPGFTPGQLMSALGIGSVAIGFAFKDIFQNLLSGILILLSEPFRIGDDIIV 168
Query: 415 GGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYSDDL 474
G++G V + + T +R+ D + I++PN+ ++ I T RR + GI Y DD
Sbjct: 169 NGLEGTVEDIQIRATYLRSPDGRRILIPNATVYTSSITVNTAYPRRRCNFDVGISYEDDA 228
Query: 475 LKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDD--YWDVYWDVTKE 532
KA+ ++ +I+ + +L P ++ V L+ S+ V W+ T + +V ++
Sbjct: 229 QKAKELILNILNNQRTILSQPAFSVNVSALSDFSVRLSVFWWIDTKETNIGASVSEVQEQ 288
Query: 533 VKLRFDREGISIPFPQQDVHLHLVD 557
V FD GISIP+P Q+V ++ D
Sbjct: 289 VIKAFDEHGISIPYPVQEVKVYRGD 313