Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., Small-conductance mechanosensitive channel from Acinetobacter radioresistens SK82

 Score =  105 bits (261), Expect = 4e-27
 Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 4/205 (1%)

Query: 357 GILVGL--SQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHA 414
           G+L+ L  S  G     +++  GI  V IGFA +D   N  +G+++L+  PF +GD +  
Sbjct: 109 GLLIALVISVPGFTPGQLMSALGIGSVAIGFAFKDIFQNLLSGILILLSEPFRIGDDIIV 168

Query: 415 GGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYSDDL 474
            G++G V  + +  T +R+ D + I++PN+ ++   I   T    RR +   GI Y DD 
Sbjct: 169 NGLEGTVEDIQIRATYLRSPDGRRILIPNATVYTSSITVNTAYPRRRCNFDVGISYEDDA 228

Query: 475 LKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDD--YWDVYWDVTKE 532
            KA+ ++ +I+ +   +L  P  ++ V  L+  S+   V  W+ T +        +V ++
Sbjct: 229 QKAKELILNILNNQRTILSQPAFSVNVSALSDFSVRLSVFWWIDTKETNIGASVSEVQEQ 288

Query: 533 VKLRFDREGISIPFPQQDVHLHLVD 557
           V   FD  GISIP+P Q+V ++  D
Sbjct: 289 VIKAFDEHGISIPYPVQEVKVYRGD 313