Pairwise Alignments

Query, 408 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., Outer membrane protein/protective antigen OMA87 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 57.4 bits (137), Expect = 8e-13
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 234 SLIGLEY----DSRDFEPNPQSGSYINLEWSDYRDRYGSDFDYQQWVFNLRHYQRLTPQT 289
           +L+GL +    D+RD   NP +G Y  + +       GSD    Q     R Y  LT   
Sbjct: 221 TLVGLSFNGVLDTRDNVNNPYAGRYAMVNFKVNPTFLGSDQSSTQLWMEYRDYFNLTDDN 280

Query: 290 --IFAM-EWFNQSFTGEVPWFDHAMLGDDQRMRG---YYQGQYRDKHFATAQFEIR-HSF 342
             I A+  + N + +G++P+ +   +G DQ  +    Y QG++R ++      E R H F
Sbjct: 281 NNILALWTYANLTVSGDLPYMNLPAIGWDQYSKSGEPYSQGRFRGRNLMFGGVEYRKHLF 340

Query: 343 NARH-----GMVAWLGSGSTASQFADLAESEWL-PTLGIGYRFAF--KARINVRIDLGVG 394
             R      G + +L + +   +   +   E++ P  G+G RF    KAR N+ ID G G
Sbjct: 341 ATRKNPRFMGAILYLNATTANGKANGINLFEYVEPGYGLGLRFNISQKARTNIGIDYGWG 400

Query: 395 KQ-NNGFYFQINEAF 408
               +G + ++NE F
Sbjct: 401 NYGTSGLFLRLNENF 415