Pairwise Alignments

Query, 408 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., Outer membrane protein/protective antigen OMA87 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  119 bits (299), Expect = 1e-31
 Identities = 103/372 (27%), Positives = 169/372 (45%), Gaps = 30/372 (8%)

Query: 53  SLLAEASDNVL-DKVLEKLGASETVDVSKTIDWGILPGPFVNPEQGLGIGIAAVGLYAPP 111
           S +A+  D  L DK+L    A E +D   T  W  +P    +PE  LG+G+ A+ L+ P 
Sbjct: 32  SAVADTGDAALHDKLLNT--ADEVLDWMSTDTWSFIPVVTYSPETSLGLGLGAIKLFQP- 88

Query: 112 TWQEG-----HPFSTVTITSYT-STSGSYGLGLVNRTYLNNDQWRMLIDGWISHAPSDYW 165
             +EG      P S      YT        + L    + N D +   ++  +++ P D++
Sbjct: 89  --REGASPSLRPSSMPITFIYTLKKQAILEVDLDLWKHENRDFFNASLE--LANYPFDFY 144

Query: 166 GIGAKAAEQESNKTHYDAKRLQFNPSLAYELFPSTYLKVGWQWQSYRAIAVKK------- 218
           GIG     +  N+  Y ++ L    +    ++ + YL     W  +R   V K       
Sbjct: 145 GIGNDMPAE--NQESYASRYLYLRMNYMRRVWSNVYLG---PWIEFRTEDVYKTLPGGLL 199

Query: 219 -KGDAAAELKPGVSSGSLIGLEYDSRDFEPNPQSGSYINLEWSDYRDRYGSDFDYQQWVF 277
             G  A    P V+ G  + L YDSR+    P  GS+  L W   +   GS++ + ++  
Sbjct: 200 DSGTIAGSDGPQVA-GVGLKLNYDSRNDIFQPGKGSFHQLSWITNQSFLGSEYTFDRYEV 258

Query: 278 NLRHYQRLTPQTIFAMEWFNQSFTGEVPWFDHAMLGDDQRMRGYYQGQYRDKHFATAQFE 337
           ++R Y  +    + A++ +     G  P+   ++LG  +RMRGY++G+YRD+     Q E
Sbjct: 259 DMRKYFPVWKNKVLAVQGYWSFVDGLAPFQQTSLLGGSKRMRGYFEGRYRDQLAMIYQAE 318

Query: 338 IRHSFNARHGMVAWLGSGSTASQFADLAESEWLPTLGIGYRFAFKAR-INVRIDLGVGKQ 396
           +R       GMV +  +G  A+Q +  +   +    G G+R+      IN+RID G G Q
Sbjct: 319 LRMPIYRSLGMVFFGSTGQVAAQASQYSFDRFHYGAGFGFRYQLMDEGINIRIDFGFGDQ 378

Query: 397 NNGFYFQINEAF 408
              FYF +NE F
Sbjct: 379 -TAFYFGLNEVF 389