Pairwise Alignments

Query, 408 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., Outer membrane protein/protective antigen OMA87 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 16/335 (4%)

Query: 79  SKTIDWGILPGPFVNPEQGLGIGIAAVGLYAPPTWQEGHPFSTVTITSYTSTSGSYGLGL 138
           +K +D+ ++P    N    L  G+  + +Y         P S   +++  +T+GSY +  
Sbjct: 36  AKKVDFSLMPFLSYNRNLELMFGVIPMMMYKLDPSDSISPKSLSGLSAIYTTNGSYFIAG 95

Query: 139 VNRTYLNNDQWRMLIDGWISHAPSDYWGIGAKAAEQESNKTHYD--AKRLQFNPSLAYEL 196
            NR YL  DQWR+ + G      S ++       +       YD   K    +  +  ++
Sbjct: 96  FNRWYLKEDQWRISLFGLTGDNNSQFF------MDDVDTPGFYDYGTKTTIVSVGVQRQI 149

Query: 197 FPSTYLKVGWQWQSYRAIAVKKKGDAAAELKPGVSSGSLIGLEYDSRDFEPNPQSGSYIN 256
             + Y  + + +  Y      +  D         ++G  + L  D+RD    P +G    
Sbjct: 150 VKAFYGGITYTFSHYDT----QYEDNVQPPSTTRTNGLEVNLLLDTRDAVYYPTTGKRSR 205

Query: 257 LEWSDYRDRYGSDFDYQQWVFNLRHYQRLTP-QTIFAMEWFNQSFTGEVPWFDHAMLGDD 315
           L W  Y +  G++    + +     Y  +   Q + A  +  +   G++ +     +G  
Sbjct: 206 LRWITYPEGVGNEVSANKILSEYNQYFSMRDDQDVLAARFSGKFGLGDIAFEQQVTVGGK 265

Query: 316 QRMRGYYQGQYRDKHFATAQFEIRHSFNARHGMVAWLGSGSTASQFADLAESEWLPTLGI 375
             +RGY QG+YR       Q E R++ N + G+V + G  +      D    +  P  G+
Sbjct: 266 D-IRGYSQGKYRGDGLMAFQGEYRYNLNEKMGLVGFAGMATIYGSDTDSFNWKLYPGAGV 324

Query: 376 GYRF-AFK-ARINVRIDLGVGKQNNGFYFQINEAF 408
           GYR+ AFK  + N+ +D  VGK + G YF+I EAF
Sbjct: 325 GYRYRAFKTVKFNIGLDAAVGKDDWGVYFRIGEAF 359