Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 841 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  721 bits (1861), Expect = 0.0
 Identities = 369/762 (48%), Positives = 498/762 (65%), Gaps = 6/762 (0%)

Query: 4   LRRKWISDPAFKMFKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPTLSA 63
           LRR  ++  A  +F+ ++P +S TE+ A+E+G+VWWD ELFSGKP++ +L      +LSA
Sbjct: 66  LRRTLLTRRALGLFRTIMPAMSDTERAAIESGTVWWDAELFSGKPNWQRLLQAAPASLSA 125

Query: 64  EEQSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFSALA 123
           EEQ+F+DNE+ETL  + +D++  +  +D+  E W Y +   F  +II K+YGG+ FS  A
Sbjct: 126 EEQAFLDNEVETLCDIANDWETTQIWQDMSPEGWQYTKDAGFLGMIIPKQYGGKGFSHYA 185

Query: 124 NSTIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFALTG 183
           +S +V +++TR  + A++VMVPNSLGP ELL HYGT  Q++Y+LPRLA G DIPCFALT 
Sbjct: 186 HSQVVMKLSTRCSAAAISVMVPNSLGPAELLLHYGTDAQRNYYLPRLARGEDIPCFALTS 245

Query: 184 PEAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPEHLL 243
           P AGSDAG+IPD G+VC G HEG++VLG R++W+KRYITL P+ATVLGLAF+  DP+ LL
Sbjct: 246 PYAGSDAGAIPDLGIVCKGTHEGEEVLGFRVTWDKRYITLGPIATVLGLAFRAEDPDGLL 305

Query: 244 GDKEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYAGKG 303
           G    +GITCALIP SH GV  G RH PL   F NGPT G+DVFIP++W+IGG +  G G
Sbjct: 306 GAPGSLGITCALIPTSHPGVNSGRRHWPLNAVFQNGPTTGKDVFIPLEWVIGGREQVGNG 365

Query: 304 WRMLVECLSAGRGISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGRIGG 363
           WRML+ECL+AGR ISLP+    +G +  R T AY  +RKQFG+ IGKFEGV   + R+ G
Sbjct: 366 WRMLMECLAAGRAISLPSANVGLGKVAVRGTTAYAAMRKQFGLPIGKFEGVQAPLARMAG 425

Query: 364 LTYLLEATRTLTTTSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGPMNY 423
             Y  +A R ++  SLD  EKP +++AIAKYH+TE AR I+ND MDI +G+ I  GP N+
Sbjct: 426 HLYACDAVRKVSVASLDAGEKPSVISAIAKYHVTERARIIVNDGMDIVAGKGICMGPNNF 485

Query: 424 LATHYLGVPVAITVEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAFDEL 483
           LA  Y   P+AITVEGANI+TR L+IFGQG  RCHPYV +EMEAA NPD+++  +AFD  
Sbjct: 486 LARAYQQSPIAITVEGANIMTRCLIIFGQGLIRCHPYVFREMEAARNPDRRKALEAFDSA 545

Query: 484 LFKHIAHATKNSFGALFAALTGSRFI--KANMSGPTQDYYKQMTRLSRALAVSADVAMLT 541
           +F H++    N+  A   +LTG R I   A        YY+Q  RLS  LA+ +D++M  
Sbjct: 546 MFGHVSFVLANTVRAAVHSLTGGRLIAAPAKTEPALASYYRQANRLSVVLALISDISMGV 605

Query: 542 LGGELKRKEMISARLGDALSYLYMGSAVLKKYEDEGRHQADLDYVHYAMQYCLHHAAKSL 601
           LGG LKRKE I+ RLGD LS LY+ S VLK++ED+GR QADL  VH++ Q  L  A ++L
Sbjct: 606 LGGALKRKESITGRLGDMLSQLYILSCVLKRFEDDGRPQADLPLVHWSAQDALLRAHEAL 665

Query: 602 NQAYRNYPVTGVGAILKGLLFPLGNHFAPPSDELAVKLAESLMTPGAHRDRLTALCYIGK 661
            + + NYP     A+++GL FP G     PSD L  ++A+ + TPG  RDRL A  YI +
Sbjct: 666 AEVFDNYPSKPAAAVVRGLTFPFGIPLRKPSDRLLAQVADVVQTPGETRDRLLANSYIPR 725

Query: 662 GEDDSVGLMEKAFLAMYSVKGLERKLQQGVKEGKVARKGLLVDRL----AQAEQAGVLSA 717
            E D +   E  F  +  V+ ++ +L+  VK+G +    +          +A    ++S 
Sbjct: 726 PEIDKLSYGELGFRLLPQVELIDARLKPAVKQGLIEPMPISATAFTGWRVRARALDLISD 785

Query: 718 DEVASILAAEKLRSRAIQVDHFSHDFSQIHTHQTTKPKLNSV 759
           DE   +    +     IQVD F  DF  +   Q  K  L  V
Sbjct: 786 DEDTLLGRYVEYADHGIQVDDFPQDFGLLEALQQRKQALEPV 827