Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas simiae WCS417

 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 98/371 (26%), Positives = 173/371 (46%), Gaps = 37/371 (9%)

Query: 88  QDRDLPKEVWDYLRKERFFSLIISKEYGGREFSALANSTIVSRIATRSISTAVTVMVPNS 147
           ++   PKE    + +  FF +++ +++GG +   LA +  +  IA    + +  + V NS
Sbjct: 31  REHRFPKEAIGEMAELGFFGMLVPEQWGGCDTGYLAYAMALEEIAAGDGACSTIMSVHNS 90

Query: 148 LGPGELLSHYGTQEQKDYWLPRLADGTDIPCFALTGPEAGSDAGSIPDQGVVCYGKHEGK 207
           +G   +L  +G  +QK+ +L  LA G  +  FALT P+AGSDA S+  +      + EG 
Sbjct: 91  VGCVPVLK-FGNDQQKEQFLKPLASGAMLGAFALTEPQAGSDASSLKTR-----ARLEGD 144

Query: 208 DVLGIRLSWNKRYITLAPVATVLGLAFKLSDPEHLLGDKEEIGITCALIPASHEGVEIGE 267
             +   L+  K++IT    A V+ + F ++DP        + GI+  ++P    G  +  
Sbjct: 145 HYV---LNGCKQFITSGQNAGVV-IVFAVTDPA-----AGKRGISAFIVPTDSPGYSVAR 195

Query: 268 RHDPLGL-AFMNGPTRGQDVFIPMDWLIGGADYAGKGWRMLVECLSAGR-GISLPALGTA 325
             D LG  A        +DV +P+   +G     G+G+++ +  L  GR GI+  A+G A
Sbjct: 196 VEDKLGQHASDTCQILFEDVKVPVANRLG---EEGEGYKIALANLEGGRVGIASQAVGMA 252

Query: 326 IGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGRIGGLTYLLEATRTLTTTSLDLKE-- 383
                A     Y   R+ FG  I + + VA    R+  +   +   R +   +  L++  
Sbjct: 253 RAAFEAARD--YARERESFGKPIIEHQAVA---FRLADMATQIAVARQMVHYAAALRDSG 307

Query: 384 KPGIVTA-IAKYHMTEIARTILNDAMDIHSGRA-IQDGPMNYLATHYLGVPVAITVEGAN 441
           KP +V A +AK   +E+A  + + A+    G   + D P+  +   Y  V V    EG +
Sbjct: 308 KPALVEASMAKLFASEMAEKVCSAALQTLGGYGYLSDFPLERI---YRDVRVCQIYEGTS 364

Query: 442 -----ILTRNL 447
                +++RNL
Sbjct: 365 DIQRMVISRNL 375