Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  716 bits (1848), Expect = 0.0
 Identities = 365/744 (49%), Positives = 498/744 (66%), Gaps = 4/744 (0%)

Query: 1   MSSLRRKWISDPAFKMFKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPT 60
           +  LRR++ + P F  F+KVLPP+S+TE++A++AG+VWWDGELFSG+PD+ KL  YPK  
Sbjct: 64  LPDLRRQYFTKPLFSWFQKVLPPMSETERDAIDAGTVWWDGELFSGRPDWDKLLAYPKAQ 123

Query: 61  LSAEEQSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFS 120
           L+ EEQ+FID   E L AM+ D++I  Q  DLP   W++++   FF+LII KEYGG+ FS
Sbjct: 124 LTEEEQAFIDGPTEELCAMVSDWEI-GQAMDLPPAAWEHIKTHGFFALIIPKEYGGKGFS 182

Query: 121 ALANSTIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFA 180
           A A+S +  ++ATRS   A TVMVPNSLGP ELL HYGT+EQ++++LPRLA G DIPCFA
Sbjct: 183 AYAHSQVAMKLATRSGDLASTVMVPNSLGPAELLLHYGTEEQRNHYLPRLARGDDIPCFA 242

Query: 181 LTGPEAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPE 240
           LTGP AGSDAG++PD GV+C G+ EGK+ LG+RL+W KRYITL PVAT+LGLAFK  DP+
Sbjct: 243 LTGPLAGSDAGAMPDTGVICKGEWEGKETLGLRLNWEKRYITLGPVATLLGLAFKAHDPD 302

Query: 241 HLLGDKEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYA 300
           HLLG++E++GI+ ALIP    GVEIG RH PLG AFMNGP  G+DVFIP+++LIGG +  
Sbjct: 303 HLLGEEEDLGISLALIPTDTPGVEIGRRHLPLGAAFMNGPNAGKDVFIPLEFLIGGQEML 362

Query: 301 GKGWRMLVECLSAGRGISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGR 360
           GKGW ML+ CLS GR ISLPA+GT     T+  TG Y  VR+QF + +  FEG+ EA+ R
Sbjct: 363 GKGWMMLMNCLSVGRSISLPAVGTGAAKFTSLVTGQYAQVREQFNVPLSAFEGIQEALAR 422

Query: 361 IGGLTYLLEATRTLTTTSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGP 420
           IGG  +L+++ R LT  ++DL EKP +++AI KYH+TE  R  ++ AMD+H G+ I  GP
Sbjct: 423 IGGNAWLMDSARMLTANAVDLGEKPSVLSAILKYHLTERGRECISHAMDVHGGKGIIMGP 482

Query: 421 MNYLATHYLGVPVAITVEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAF 480
            NYL  ++ G P+ ITVEGANIL+RNLMIFGQGA RCHP+VLKEM  A   D  +  K F
Sbjct: 483 NNYLGRNWQGAPIFITVEGANILSRNLMIFGQGAIRCHPFVLKEMALAGRDDHDQALKEF 542

Query: 481 DELLFKHIAHATKNSFGALFAALTGSRFIKANMSGPTQDYYKQMTRLSRALAVSADVAML 540
           D LL +HI  A  N+   L   L    F KA  +  +Q Y++ + R + A A+ AD++M+
Sbjct: 543 DGLLMQHIGFAVSNAASTLVLNLGVGHFEKAPGNRLSQGYFRALNRQAAAFALLADLSMM 602

Query: 541 TLGGELKRKEMISARLGDALSYLYMGSAVLKKYEDEGRHQADLDYVHYAMQYCLHHAAKS 600
            LGGELKR+E +SARLGD LS++Y+ SA LK+Y D            +AM+  L  + ++
Sbjct: 603 LLGGELKRRERLSARLGDVLSHMYLASAALKRYHDLDSPDHLEPLFAWAMEESLGESERA 662

Query: 601 LNQAYRNYPVTGVGAILKGLLFPLGNHFAPPSDELAVKLAESL--MTPGAHRDRLTALCY 658
           L++   N+P   +G +L+ ++FP G     PSD L  ++A  +         + L A CY
Sbjct: 663 LDELLSNFPNKVLGCLLRVIVFPFGRRHTGPSDALDAEVAAVIGRAKGDPTLEELLAGCY 722

Query: 659 IGKGEDDSVGLMEKAFLAMYSVKGLERKLQQGVKEGKVARKGLLVDRLAQAEQAGVLSAD 718
             +  +D VG ++ A+  + +   L++KL   +K G+V +       +  A  AGVL   
Sbjct: 723 RPQSAEDPVGALQHAYDLLGASHSLQKKLHVALKSGQV-KPTAGEHAIDAALHAGVLQPA 781

Query: 719 EVASILAAEKLRSRAIQVDHFSHD 742
           E  ++   E  R + I VD FS +
Sbjct: 782 EAHTLREVEAARRKVIDVDDFSKE 805