Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score = 87.8 bits (216), Expect = 9e-22
 Identities = 93/391 (23%), Positives = 163/391 (41%), Gaps = 44/391 (11%)

Query: 66  QSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFSALANS 125
           Q  +D E+  L   +D+      +   P+ +             + +EYGG     L  +
Sbjct: 16  QRVVDKEIAPLAQQMDE------EEKFPEHLIRIFGDMGLMQARVPEEYGGPGLD-LTTT 68

Query: 126 TIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFALTGPE 185
            +   +  R   T   ++  N++     L H+GT EQ+  WLPR+A G  +   A+T P 
Sbjct: 69  CMAKELVARVSMTGAQLINQNTISFVLPLLHFGTDEQRRKWLPRVAKGGVVSSVAITEPH 128

Query: 186 AGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPEHLLGD 245
           AGSD G++    V      EG   +   ++  K +IT+AP+A  + L  K  +      D
Sbjct: 129 AGSDVGAMKTNAV-----REGDHYV---VNGQKCFITMAPLADYITLFAKTGEVNRRGVD 180

Query: 246 KEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTRGQDVF-----IPMDWLIGGADYA 300
                I+C ++     G+ +G     +G       T   D+F     +P++  +G     
Sbjct: 181 ----NISCFIVDMKSAGITLGGSEKMMG----QRGTPHADIFFDNVRVPVENRMG---EE 229

Query: 301 GKGWRMLVECLSAGR-GISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMG 359
           G+G+   +  L   R  ++  A+G A G        AY   RK FG +IG+F+G+     
Sbjct: 230 GRGFISCMHILDLNRPTVAASAVGVAQGAFDIAV--AYAKERKAFGKAIGEFQGL---QF 284

Query: 360 RIGGLTYLLEATRTL---TTTSLDLKEKPGI--VTAIAKYHMTEIARTILNDAMDIHSGR 414
            +  +   +EA R L    T ++D  +   +  + ++ K   T++A  +  DA+ +  G 
Sbjct: 285 MLADMHIQIEAARALLYKCTRAIDAGQHDRLTEMASMVKCFCTDVAMKVTTDAVQVLGGH 344

Query: 415 AIQDGPMNYLATHYLGVPVAITVEGANILTR 445
               G  N++        V    EG N + R
Sbjct: 345 GYIRG--NHVERMMRDAKVLQIYEGTNQIQR 373