Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 759 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

 Score =  566 bits (1459), Expect = e-165
 Identities = 310/646 (47%), Positives = 409/646 (63%), Gaps = 23/646 (3%)

Query: 1   MSSLRRKWISDPAFKMFKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPT 60
           +++L  +W    A K F K LPPL  TE+ A+EAG+V ++G LF+G+PDF  L       
Sbjct: 3   LATLIGRW----AMKPFSKALPPLGDTERAALEAGTVGFEGRLFAGRPDFDVLAAMGPNQ 58

Query: 61  LSAEEQSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFS 120
           L+  EQ+F+DNE+  L  MLDD+ I  Q RDLP EVW +LR++RFF +II +E+GG  FS
Sbjct: 59  LTEREQAFLDNEVRALCHMLDDHAI-DQARDLPPEVWRFLREKRFFGMIIPEEFGGLGFS 117

Query: 121 ALANSTIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFA 180
             A++T+V+RIAT + +TAVTVMVPNSLGP ELL  YGT  QKD++LPRLADG ++PCF 
Sbjct: 118 HFAHATVVTRIATINTATAVTVMVPNSLGPAELLLRYGTDAQKDHYLPRLADGRELPCFG 177

Query: 181 LTGPEAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPE 240
           LT P AGSDA SIPD+GVV   + EG+   G  + ++KRYITLAPVATV+GLAF   D  
Sbjct: 178 LTSPYAGSDAASIPDRGVVVEREFEGRMTRGFLVDFDKRYITLAPVATVVGLAFHAVDES 237

Query: 241 HLLGDKEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYA 300
              G +E +GITCALIP  HEG+EIG RH P+  AFMNGP  G+ VF+PMDW+IGG    
Sbjct: 238 RPEGQRE-LGITCALIPVPHEGMEIGRRHRPMDSAFMNGPIHGRQVFVPMDWIIGGDKQV 296

Query: 301 GKGWRMLVECLSAGRGISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGR 360
           G+GWRML+ECL+AGR ISLPALG+A+       +  YG +R+QFGM +GKF  VA  + +
Sbjct: 297 GQGWRMLMECLAAGRAISLPALGSAMQQTALYVSNGYGQIREQFGMPVGKFHAVAGLVAQ 356

Query: 361 IGGLTYLLEATRTLTTTSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGP 420
           +    Y  +A R  T  +LD  E+P + +AI K  +TE  R  +N  MDI  G+ I  GP
Sbjct: 357 MSAELYATDAARRFTAAALDKGERPSVASAILKVQLTEAGRRAVNHGMDILGGKGIIYGP 416

Query: 421 MNYLATHYLGVPVAITVEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAF 480
            N L   Y   P+AITVEGANILTR L++FGQGA RCHP+VL EM A    D+    KA 
Sbjct: 417 SNLLGVAYRQAPIAITVEGANILTRALIVFGQGAVRCHPHVLDEMAAVQAGDETALGKA- 475

Query: 481 DELLFKHIAHATKNSFGALFAALTGSRFIKANMSGPTQDYYKQ---MTRLSRALAVSADV 537
              L  H  H   N + +LF A          +  P +D   +   + R+S   A++AD+
Sbjct: 476 ---LMAHGRHVATNLWHSLFGAPV--------LGEPPEDLLPEARLVARMSAKYALTADL 524

Query: 538 AMLTLGGELKRKEMISARLGDALSYLYMGSAVLKKYEDEGRHQADLDYVHYAMQYCLHHA 597
           AM  LGG+LKR E++SARLGD L++LY+ SA + +Y  +G  +  L +   A++  L  A
Sbjct: 525 AMGMLGGKLKRMELLSARLGDVLAHLYLASASIWRYRVDGAPEL-LPFAQAAIRLQLDEA 583

Query: 598 AKSLNQAYRNYPVTGVGAILKGLLFPLGNHFAPPSDELAVKLAESL 643
            K L   Y N P  G   ++  L+     H AP  D   ++LAE L
Sbjct: 584 GKILRDLYANLPTAG-RRVIGALVLRRTAHLAPLRDVQLIELAELL 628