Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Sphingobium sp. HT1-2

 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 88/326 (26%), Positives = 151/326 (46%), Gaps = 28/326 (8%)

Query: 93  PKEVWDYLRKERFFSLIISKEYGGREFSALANSTIVSRIATRSISTAVTVMVPNSLGPGE 152
           P+ +++ +     + +   + YGG E  +++ +  +  +A    + +  V + NS+    
Sbjct: 44  PRSLFEEMAGLGLWGMTAPEAYGGAEADSVSYALALMELAAADGALSTIVSIQNSILVSG 103

Query: 153 LLSHYGTQEQKDYWLPRLADGTDIPCFALTGPEAGSDAGSIPDQGVVCYGKHEGKDVLGI 212
           LL   G++EQK  +LP L  G  I  FALT  +AGSDA ++  + V   G        G 
Sbjct: 104 LLKD-GSEEQKARFLPDLIGGRTIGAFALTESDAGSDASAVRTRAVKVDG--------GW 154

Query: 213 RLSWNKRYITLAPVATVLGLAFKLSDPEHLLGDKEEIGITCALIPASHEGVEIGERHDPL 272
           R++  K++IT   +  V+ +   ++DP     D  + G++  L+P    G  + +    +
Sbjct: 155 RITGAKQFITSGKIGGVV-MIVAVTDP-----DAGKKGLSVFLVPTDRPGYAVDKVEHKM 208

Query: 273 GL-AFMNGPTRGQDVFIPMDWLIGGADYAGKGWRMLVECLSAGR-GISLPALGTAIGHLT 330
           G  A      R  D+F+  D LIG     G+G+   +  L  GR GI+   +G A   L 
Sbjct: 209 GQGASDTCALRFDDMFVEDDLLIG---QPGQGYAQALANLETGRIGIAAQCVGMAQAALE 265

Query: 331 ARTTGAYGYVRKQFGMSIGKFEGVAEAMGRIGGLTYLLEATRTLTTTSLDLKE--KPGIV 388
                AY   RK FG +I + + V     R+  L   LEA R L  ++  +K+  +P + 
Sbjct: 266 IAI--AYAKDRKSFGKAIIEHQAVG---FRLADLATRLEAARQLVLSAAAMKDSGQPALT 320

Query: 389 TA-IAKYHMTEIARTILNDAMDIHSG 413
            A +AK   +E A  +++ AM    G
Sbjct: 321 QASMAKLFASEAAEAVVSGAMQTLGG 346