Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 97/374 (25%), Positives = 176/374 (47%), Gaps = 43/374 (11%)

Query: 88  QDRDLPKEVWDYLRKERFFSLIISKEYGGREFSALANSTIVSRIATRSISTAVTVMVPNS 147
           +D   PKE  D + +   F +++ +++GG +   +A +  +  IA    + +  + V NS
Sbjct: 31  KDHRFPKEAIDEMAELGLFGMLVPEQWGGSDTGYVAYAMALEEIAAGDGACSTIMSVHNS 90

Query: 148 LGPGELLSHYGTQEQKDYWLPRLADGTDIPCFALTGPEAGSDAGSIPDQGVVCYGKHEGK 207
           +G   +L  +G ++QK+ +L  LA G  +  FALT P+AGSDA S+  +      + EG 
Sbjct: 91  VGCVPIL-RFGNEQQKEQFLTPLATGAMLGAFALTEPQAGSDASSLKTR-----ARLEGD 144

Query: 208 DVLGIRLSWNKRYITLAPVATVLGLAFKLSDPEHLLGDKEEIGITCALIPASHEGVEIGE 267
             +   L+ +K++IT    A V+ + F ++DPE       + GI+  ++P    G ++  
Sbjct: 145 HYV---LNGSKQFITSGQNAGVV-IVFAVTDPE-----AGKRGISAFIVPTDSPGYQVAR 195

Query: 268 RHDPLGLAFMNGPTRGQDVF----IPMDWLIGGADYAGKGWRMLVECLSAGR-GISLPAL 322
             D LG    +     Q VF    +P+   +G     G+G+++ +  L  GR GI+  A+
Sbjct: 196 VEDKLG---QHASDTCQIVFDNVQVPVANRLGA---EGEGYKIALANLEGGRIGIASQAV 249

Query: 323 GTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGRIGGLTYLLEATRTLTTTSLDLK 382
           G A           Y   R+ FG  + + + VA    R+  +   +   R +   +  L+
Sbjct: 250 GMA--RAAFEVARDYANERQSFGKPLIEHQAVA---FRLADMATKISVARQMVLHAAALR 304

Query: 383 E--KPGIVTA-IAKYHMTEIARTILNDAMDIHSGRA-IQDGPMNYLATHYLGVPVAITVE 438
           +  +P +V A +AK   +E+A  + +DA+    G   + D P+  +   Y  V V    E
Sbjct: 305 DAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERI---YRDVRVCQIYE 361

Query: 439 GAN-----ILTRNL 447
           G +     ++ RNL
Sbjct: 362 GTSDIQRMVIARNL 375