Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., medium-long chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  722 bits (1864), Expect = 0.0
 Identities = 369/737 (50%), Positives = 495/737 (67%), Gaps = 4/737 (0%)

Query: 5   RRKWISDPAFKMFKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPTLSAE 64
           RRK  + P F+ F++ LPP+SQTE+EA++AG+VWWDGELFSG+PD+  L  YP P L+ E
Sbjct: 68  RRKLFTAPVFRWFQRTLPPMSQTEREAIDAGTVWWDGELFSGRPDWRTLLAYPAPKLTEE 127

Query: 65  EQSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFSALAN 124
           EQ+FID   E L AM+ D++I  QD DLP E W ++++  FF+LII KEYGG+ FSA A+
Sbjct: 128 EQAFIDGPTEALCAMVSDWQI-GQDLDLPPEAWAHIKQHGFFALIIPKEYGGKGFSAYAH 186

Query: 125 STIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFALTGP 184
           S +  ++ATRS   A TVMVPNSLGP ELL HYGT EQ++ +LPRLA G +IPCFALTGP
Sbjct: 187 SQVAMKLATRSGDLASTVMVPNSLGPAELLLHYGTDEQRNRYLPRLARGEEIPCFALTGP 246

Query: 185 EAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPEHLLG 244
            AGSDAG++PD G++C G+ +G++V+G+RL+W KRYITL PVAT+LGLAFK  DP+HLLG
Sbjct: 247 LAGSDAGAMPDTGIICKGQWQGEEVIGLRLNWEKRYITLGPVATLLGLAFKAYDPDHLLG 306

Query: 245 DKEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYAGKGW 304
           ++EE+GI+ ALIP    GVEIG+RH PLG AFMNGP  G+DVF+P+D+LIGG    GKGW
Sbjct: 307 EQEELGISLALIPTDTPGVEIGKRHLPLGAAFMNGPNSGKDVFVPLDFLIGGQAMLGKGW 366

Query: 305 RMLVECLSAGRGISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGRIGGL 364
            ML+ CLS GR ISLPA+GT     T+  TG Y  +R+QF + +  FEG+ E++ RIGG 
Sbjct: 367 MMLMNCLSVGRSISLPAVGTGAAKYTSLVTGQYANIREQFNVPLAAFEGIQESLARIGGN 426

Query: 365 TYLLEATRTLTTTSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGPMNYL 424
            +L+++ R LT  ++DL EKP +++AI KYH+TE  R  +  AMD+H G+ I  GP NYL
Sbjct: 427 AWLMDSARLLTAKAVDLGEKPSVLSAILKYHLTERGRECIQHAMDVHGGKGIIMGPNNYL 486

Query: 425 ATHYLGVPVAITVEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAFDELL 484
             ++ G P+ ITVEGANIL+RNLMIFGQGA RCHP+VLKEM  A   D  +  K FD+LL
Sbjct: 487 GRNWQGAPIFITVEGANILSRNLMIFGQGAIRCHPFVLKEMALAGREDHDQALKEFDDLL 546

Query: 485 FKHIAHATKNSFGALFAALTGSRFIKANMSGPTQDYYKQMTRLSRALAVSADVAMLTLGG 544
            KHI  A  N+   L   L   RF +      +Q Y++ + R + A A+ AD++M+ LGG
Sbjct: 547 MKHILFAAGNAASTLVYGLGLGRFERVPGDALSQGYFRALNRQAAAFAMMADLSMMLLGG 606

Query: 545 ELKRKEMISARLGDALSYLYMGSAVLKKYEDEGRHQADLDYVHYAMQYCLHHAAKSLNQA 604
            LKR+E +SARLGD LSYLY+ SA LK+Y D+G  +     + +AM+  L    ++L++ 
Sbjct: 607 ALKRRERLSARLGDVLSYLYLASAALKRYHDQGSPEYLQPLLRWAMEESLGQTERALDRL 666

Query: 605 YRNYPVTGVGAILKGLLFPLGNHFAPPSDELAVKLAESL--MTPGAHRDRLTALCYIGKG 662
             N+P   VG  L+ L+FP G     P DEL  ++AE +         + L A CY  + 
Sbjct: 667 LDNFPNRFVGCALRVLVFPFGRRHKGPGDELDAEVAELIGRRKGDPALEELLAGCYRPQA 726

Query: 663 EDDSVGLMEKAFLAMYSVKGLERKLQQGVKEGKVARKGLLVDRLAQAEQAGVLSADEVAS 722
           E D V  +++A   +     L + L Q VKEGKV +       +  A +AGVL  D+   
Sbjct: 727 EHDPVADLQRASDLLEDTAQLSKALYQAVKEGKV-QPAPGQSGIDAAVKAGVLQPDDGQR 785

Query: 723 ILAAEKLRSRAIQVDHF 739
           +  AE+ R + I VD F
Sbjct: 786 LHEAEQARRKVIDVDAF 802