Pairwise Alignments

Query, 876 a.a., DNA topoisomerase 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 180 a.a., Uncharacterized protein YrdD from Escherichia coli ECRC101

 Score = 48.1 bits (113), Expect = 4e-10
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)

Query: 717 CDKCGSDMVLKNGRFGKYMGCTN-DACKNTR--KILKNGEVAPPKEEPVHFPELPCENSD 773
           C KCG+++V+++G+ G ++GC+   AC   R  K   +G +    E  V      C    
Sbjct: 15  CPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLEGQV------CPACG 68

Query: 774 AYFVLRDGASGLFFAASNFPKSRET 798
           A  VLR G  G+F    N+P+   T
Sbjct: 69  ANLVLRQGRFGMFIGCINYPECEHT 93



 Score = 41.2 bits (95), Expect = 5e-08
 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 707 VKGYEGPTVECDKCGSDMVLKNGRFGKYMGCTN-DACKNTRKILKNGEVA 755
           VK  EG    C  CG+++VL+ GRFG ++GC N   C++T  I K  E A
Sbjct: 56  VKVLEGQV--CPACGANLVLRQGRFGMFIGCINYPECEHTELIDKPDETA 103