Pairwise Alignments

Query, 876 a.a., DNA topoisomerase 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 186 a.a., topoisomerase DNA-binding C4 zinc finger domain-containing protein from Dickeya dadantii 3937

 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 9/93 (9%)

Query: 711 EGPTVECDKCGSDMVLKNGRFGKYMGCTN-DACKNTR--KILKNGEVAPPKEEPVHFPEL 767
           E P   C +CG+ +V+++G+ G ++GC+    C   R  K   +G V    +        
Sbjct: 9   EKPQQVCPECGAVLVIRSGQHGPFLGCSRYPECHYIRPLKAYADGHVVKVLDGQ------ 62

Query: 768 PCENSDAYFVLRDGASGLFFAASNFPKSRETRA 800
            C    +  VLR G  G+F   SN+P+   T A
Sbjct: 63  HCPRCQSALVLRQGRYGMFICCSNYPECEHTEA 95



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 30/185 (16%)

Query: 605 LCPTCSRPMGIRTASTGVFLGCSGYGLPPKERCKTTINLGDEEGVINVLEEDVETAALRA 664
           +CP C   + IR+   G FLGCS Y   P+      +    +  V+ VL+          
Sbjct: 14  VCPECGAVLVIRSGQHGPFLGCSRY---PECHYIRPLKAYADGHVVKVLD---------- 60

Query: 665 KKRCPICETAMDAYLIDDKRKLHV-CGNNPNCEGFIVEEGEFKVKGYEGPTVECDKCGSD 723
            + CP C++A+   L   +  + + C N P C      E    +   +  T+ C +C   
Sbjct: 61  GQHCPRCQSAL--VLRQGRYGMFICCSNYPEC------EHTEAIDRPDETTLTCPQCHEG 112

Query: 724 MVL-KNGRFGK-YMGCTN-DACKNTRKILKNGEVAPPKEEPVHFPELPCENSDAYFVLRD 780
            +L +  R+GK +  C    AC+ T   L N  +A  + E  H+P L  E   A  V R 
Sbjct: 113 RLLQRKSRYGKTFHSCERYPACQFT---LNNKPIA-GECEYCHYP-LLIEKKTAQGVRRF 167

Query: 781 GASGL 785
            AS L
Sbjct: 168 CASKL 172