Pairwise Alignments

Query, 336 a.a., PurR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., HTH-type transcriptional repressor CytR from Xanthobacter sp. DMC5

 Score =  165 bits (418), Expect = 1e-45
 Identities = 104/327 (31%), Positives = 167/327 (51%), Gaps = 5/327 (1%)

Query: 2   ATIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLKCNTTRT 61
           AT++DVA+LAGVST TVS  +++   V E T  +V +A+ +LNY P   AR+L    T T
Sbjct: 7   ATLQDVAQLAGVSTATVSRALSRPDLVQEETLARVSDAISRLNYVPGGAARALASGKTLT 66

Query: 62  IGMLVTQSTNLFFSEVIDGVESYCYRQGYTLILCNTGGIYEKQRDYIRMLAEKRVDGILV 121
           IG +V    +  F+  I  +++     GY L++        ++   +R +  + VD ++V
Sbjct: 67  IGAVVPTLDHAIFARAIQAMQTELAGNGYQLLVAAHDYAPAQEAAAVRAMLARGVDALMV 126

Query: 122 MCSDLTQELQDMLDAHKDIPKVVMDWGPETSHADKIIDNSEEGGYLATKYLTDRGHTEIA 181
           + +D  +E   +L     +P VV+ W  +        DN E+ G+L   +L D GH    
Sbjct: 127 VGADHLEETWALLTT-ASVP-VVLSWSFDARLPAIGFDN-EKAGWLIADHLLDLGHRRFG 183

Query: 182 CLSGH-FVKAACQERIQGFRRAMAEAKLTVNEDWILEGNFECDTAVLAADKIIAMDKRPT 240
            +SG        + R+ G R A+A   L +    ++E  F          +++A    PT
Sbjct: 184 MISGFTHANDRARSRVAGVRAALAARGLELPSSCVVEAPFTLAGGRAGLAELMARATPPT 243

Query: 241 AVFCFNDTMALGLMSRLQQKGIRIPEDMSVIGYDNIELAEYFSPPLTTVHQPKRRVGKNA 300
           AV C ND +A G +   Q  GI +P  +SV+G DN+E+A + +PPLTTVH P   +G+  
Sbjct: 244 AVVCGNDLLAAGALFEAQASGIAVPGALSVVGIDNLEIAAHLAPPLTTVHLPTTELGRTV 303

Query: 301 FEILLERIKDKEHERRIFEMHPEIVER 327
              LL R++ +    R+ E+  E+V R
Sbjct: 304 ARHLLARLRGEAQPHRV-ELPIELVIR 329