Pairwise Alignments

Query, 336 a.a., PurR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  246 bits (629), Expect = 5e-70
 Identities = 145/332 (43%), Positives = 206/332 (62%), Gaps = 7/332 (2%)

Query: 1   MATIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLKCNTTR 60
           MATIKDVA LAG+S TTVSHV+NKTR V+E  + KV  A+ +L+Y PSAVARSLK  +T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 61  TIGMLVTQSTNLFFSEVIDGVESYCYRQGYTLILCNTGGIYEKQRDYIRMLAEKRVDGIL 120
           TIG+LV  S N +F+E+  G+E  C R GY +ILCN+    +KQR Y+R+L EKR+DG++
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 121 VMCSDLTQELQDMLDAHKDIPKVVMDWGPETSHADKIIDNSEEGGYLATKYLTDRGHTEI 180
           V       +L   L A    P V++D   E   AD +  + E+G YLAT++L + GH ++
Sbjct: 121 VASVGQDDDLLQSL-ASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDV 179

Query: 181 ACLSGHFVKAACQERIQGFRRAMAEAKLTVNEDWILEGNFECDTAVLAADKIIAMDKRPT 240
           A + G       Q R+ GFRRAMAEA   V    +L  +F       AA +++   KRP+
Sbjct: 180 AYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLE-GKRPS 238

Query: 241 AVFCFNDTMALGLMSRLQQKGIRIPEDMSVIGYDNIELAEYFSPPLTTVHQPKRRVGKNA 300
           A+F  ND +  G++    ++ I +P ++SVIG+D+IEL+ Y  P LTTV Q  R +G++A
Sbjct: 239 AIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESA 298

Query: 301 FEILLERI---KDKEHERRIFEMHPEIVERDT 329
             +LL RI   +    E+RI  + P IV R++
Sbjct: 299 ASLLLTRIATPRQGAAEQRI--VAPRIVLRES 328