Pairwise Alignments

Query, 336 a.a., PurR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., DNA-binding transcriptional regulator CytR from Erwinia tracheiphila SCR3

 Score =  192 bits (489), Expect = 8e-54
 Identities = 105/312 (33%), Positives = 184/312 (58%), Gaps = 5/312 (1%)

Query: 2   ATIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLKCNTTRT 61
           AT++DVA+ AGVST TVS  +     V+  T++KV EAV  + Y+P+ + R+ +   +RT
Sbjct: 10  ATMRDVAKKAGVSTATVSRTLMNPDKVSAATRQKVEEAVIAVGYSPNGITRNARRTESRT 69

Query: 62  IGMLVTQSTNLFFSEVIDGVESYCYRQGYTLILCNTGGIYEKQRDYIRMLAEKRVDGILV 121
           I ++V    + FFSE+I G+E     +GY +++ +       ++ ++ ++  ++VDG+++
Sbjct: 70  ILVIVPNICDPFFSEIIRGIEVVAADRGYLVLIGDCAHQTCHEQSFLNLIMTRQVDGMIM 129

Query: 122 MCSDLTQELQDMLDAHKDIPKVVM--DWGPETSHADKIIDNSEEGGYLATKYLTDRGHTE 179
           + S L  E     +  +++P +VM  ++ PE       IDN     + A  +L   GH+ 
Sbjct: 130 LGSQLPFESTP--EERQNLPPMVMANEFAPELELPSVHIDNLT-AAFEAVNHLLKLGHSR 186

Query: 180 IACLSGHFVKAACQERIQGFRRAMAEAKLTVNEDWILEGNFECDTAVLAADKIIAMDKRP 239
           IAC++G      CQ R+QG+ +A+    +     +I   +F  D    A  +++A+   P
Sbjct: 187 IACIAGPHDMPLCQYRLQGYIQALQRHGIVAEPRYIARVDFTFDAGATAMKQLMALPAPP 246

Query: 240 TAVFCFNDTMALGLMSRLQQKGIRIPEDMSVIGYDNIELAEYFSPPLTTVHQPKRRVGKN 299
            A+FC +D +ALG M++ +  G+RIP+D+S+IG+D+IEL+ Y  PPLTTV QP+  +G+ 
Sbjct: 247 DALFCHSDILALGAMAQAKNMGLRIPQDLSLIGFDDIELSRYSDPPLTTVIQPRFNIGRE 306

Query: 300 AFEILLERIKDK 311
           A  +LLE+++ K
Sbjct: 307 AMSLLLEQLQGK 318