Pairwise Alignments

Query, 260 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Erwinia tracheiphila SCR3

 Score =  248 bits (634), Expect = 7e-71
 Identities = 128/256 (50%), Positives = 172/256 (67%), Gaps = 3/256 (1%)

Query: 3   EDRNFDDIAHKFAKNIYGSDKGEIRQVIVWEDLEQLLSQLDTQKVPLHVLDAGGGLAQVS 62
           +DRNFDDIA KF++NIYG+ KG IRQ IV ++L+ +L+ L T   PL VLDAGGG  + S
Sbjct: 2   QDRNFDDIAEKFSQNIYGTTKGRIRQAIVRQELDDILASLPTG--PLRVLDAGGGEGRTS 59

Query: 63  QKIARLGHRVTLCDLSSEMLQLAEQDIANNGLLEQYRFVHSPVQTIQAHLDAPVDLVLFH 122
            ++A LGHRV LCDLS EML  A    A  G+ E  +F     Q I   LD P DLVLFH
Sbjct: 60  CQLAALGHRVLLCDLSEEMLNRARTHAAEKGVSENMQFKQISAQQISQDLDKPADLVLFH 119

Query: 123 AVMEWLAEPKPALQNLLAQVRPGGMVSVMFYNYHGLVYKNAVCGNIPHVLEDMPHRKRFK 182
           AV+EW+A+P+  L  L   + PGG++S+MFYN +GL+ +  V GN  ++  D+  RKR  
Sbjct: 120 AVLEWVADPEAVLVALYDALVPGGVLSLMFYNVNGLMMQTLVLGNFGYMQADLRKRKRKT 179

Query: 183 LQPQKGLLPEEVYQWIEESSFEICGKSGIRCFSDYIGNMKNMGEYQYEDLVALERKFCRQ 242
           L P     PE+VY W+E+  F +  K+GIR F DY+ +     E ++E+++ALE++FCRQ
Sbjct: 180 LSPDHPRDPEQVYGWLEDVGFVVENKTGIRVFHDYMRDRHKQTE-RFEEILALEKRFCRQ 238

Query: 243 EPYLSLGRYIHVWAKK 258
           EP+LSLGRYIHV A+K
Sbjct: 239 EPFLSLGRYIHVTARK 254