Pairwise Alignments

Query, 204 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., homoserine, homoserine lactone and S-methyl-methionine efflux pump from Escherichia coli BL21

 Score = 58.9 bits (141), Expect = 6e-14
 Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 7/186 (3%)

Query: 20  LAFAFVSTFSPGPNNIMLMTSGANVGFLRTIPHMLGITFGFSIMVLLVGVGLTELFQRYP 79
           L  + + + SPG   I  MT+  N G+   +  + G+  G +I ++LVGVGL  LF R  
Sbjct: 10  LLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVGLGTLFSRSV 69

Query: 80  ILQQGLQILCTLYLVYLAVKI-----ALSRPSKEGQEYQPMSFVAAALFQWVNPKG--WS 132
           I  + L+     YL++L ++      A+   S    + +   F  A      NPK   + 
Sbjct: 70  IAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNLTNPKSIVFL 129

Query: 133 MALTAVSVFNPNASWLQLGLIALVFALVNLPSVSAWTAAGKQLSYWMNHPNYVRWFNGAM 192
            AL    +       +Q  ++ +   +V++  +  +    ++++ W+  P  ++  N   
Sbjct: 130 AALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPKQMKALNKIF 189

Query: 193 GGLLLL 198
           G L +L
Sbjct: 190 GSLFML 195