Pairwise Alignments

Query, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 677 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  893 bits (2307), Expect = 0.0
 Identities = 436/682 (63%), Positives = 518/682 (75%), Gaps = 43/682 (6%)

Query: 22  APFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPEWQ 81
           APFLP SR EM  LGWD CD+++VTGDAYVDHPSFGMAIIGRLLEAQGFRVGII+QP+WQ
Sbjct: 24  APFLPMSRAEMAALGWDQCDIVLVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIISQPDWQ 83

Query: 82  TKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDDAYTPNNKGGMRPDRCSLVYSQ 141
           + + F  LGKP LFFGVT GN+DSM+NRYTAD+++RHDDAYT   +GG RPDR ++VY+Q
Sbjct: 84  SAEPFKALGKPRLFFGVTGGNLDSMVNRYTADRRLRHDDAYTAGGEGGRRPDRSTIVYTQ 143

Query: 142 RCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILLDAKADILLFGNAERALVEVAH 201
           RCREAYKDVPI+LGGIEASLRR+AHYDYWSDKVRRSIL DAKAD+L++GNAERA+VEVA+
Sbjct: 144 RCREAYKDVPIILGGIEASLRRIAHYDYWSDKVRRSILADAKADLLIYGNAERAVVEVAN 203

Query: 202 RLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQPNKPFVPSNPYEVETQCATKGD 261
           R+A+GE+   + D+RG A+   +VPEH+  + +  +D                      D
Sbjct: 204 RIADGEAPRDIDDVRGVAL-FRRVPEHYTELHADDLDA--------------------SD 242

Query: 262 EKEEAQPITIRPSRHDAKTTAVRLPSFEKLVNDRILYAHASRVLHLETNPYSGRALVQRH 321
           E    +P  +           +RLP++E++  D+  YA ASRVLH E+NP + R LVQRH
Sbjct: 243 EGAARRPGDV----------VIRLPAYEQVEVDKEAYARASRVLHRESNPGNARPLVQRH 292

Query: 322 GDRELWVNQAPIPLTTEEMDFVFGLYYARVPHPKYGDAKIPAYDMIKTSVNIMRGCFGGC 381
           GDR+LW+N  PIPLTT+EMD V+ L YAR PHP YG+AKIPA+DMI+ SV IMRGCFGGC
Sbjct: 293 GDRDLWLNPPPIPLTTQEMDAVYDLPYARAPHPSYGEAKIPAWDMIRFSVTIMRGCFGGC 352

Query: 382 SFCSITEHEGRIIQNRSQESIINELKEIRDKVPGFTGVISDLGGPTANMYRLGCSDPKAE 441
           +FCSITEHEGRIIQNRS+ SI+ E++ IRDK PGFTGVISD+GGPTANMYR+ C DPK E
Sbjct: 353 TFCSITEHEGRIIQNRSEGSILREIELIRDKTPGFTGVISDIGGPTANMYRMACKDPKIE 412

Query: 442 ANCRRPSCVFPGICHKLNTDHKHTIDLYRAARDVDGIKKVVIASGVRYDLAIESPEYVRE 501
           A CRRPSCVFP IC  LNT H   I LYR  R+V+G+KKV++ASGVRYDLA++SPEYV+E
Sbjct: 413 AACRRPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYVKE 472

Query: 502 LVTHHVGGYLKIAPEHTEKGPLSMMMKPGMGTYDRFKELFEKYSAEAGKKQYLIPYFIAA 561
           LVTHHVGGYLKIAPEHTE+GPL  MMKPG+GTYDRFKE+F+    +AGKK YLIPYFIAA
Sbjct: 473 LVTHHVGGYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFDAAVKQAGKKYYLIPYFIAA 532

Query: 562 HPGTEDEDMVNLALWLKSNNYRCDQVQNFYPSPMCNATAMYHAEVNPLKRVKYKKPEKVP 621
           HPGT DEDM+NLALWLK N YR DQVQ F PSPM  ATAMYH  VNPL+ V+    E+V 
Sbjct: 533 HPGTTDEDMMNLALWLKKNRYRADQVQTFLPSPMATATAMYHTGVNPLRAVRRGGSERVA 592

Query: 622 VAKGEAQRRLHKALLRYHDPANWPMIREALIAMGKRHLIGDRPECLIPEKDSDLVTPAQS 681
              G  QRRLHKA LRYHDP NWP++REAL AMG+  LIG RP+ L+P        P   
Sbjct: 593 TVTGLRQRRLHKAFLRYHDPDNWPLLREALKAMGRADLIGPRPDQLVPAHQ----PPGTG 648

Query: 682 RKSGRH--------GANRFATK 695
           + +G          GA RF TK
Sbjct: 649 KAAGTRRPVRPAPAGAQRFTTK 670