Pairwise Alignments

Query, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 767 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  988 bits (2554), Expect = 0.0
 Identities = 502/778 (64%), Positives = 581/778 (74%), Gaps = 45/778 (5%)

Query: 7   PIHHYKKYWAECFGTAPFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAIIGRLLE 66
           P+  Y KYWAECFG APFLP SREEMDQLGWDSCD+IIVTGDAYVDHPSFGMAIIGRLLE
Sbjct: 6   PLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLE 65

Query: 67  AQGFRVGIIAQPEWQTKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDDAYTPNN 126
           +QGFRVGIIAQP WQ+KD FM LG+PNLFFGV AGNMDSMINRYTADKKIR D+AYTP  
Sbjct: 66  SQGFRVGIIAQPNWQSKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDEAYTPGG 125

Query: 127 KGGMRPDRCSLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILLDAKADI 186
             G RPDR SLVYSQRC+EAYK+VPIVLGGIEASLRR+AHYDYW D+VR SIL+DA ADI
Sbjct: 126 MAGKRPDRASLVYSQRCKEAYKNVPIVLGGIEASLRRIAHYDYWQDRVRNSILIDATADI 185

Query: 187 LLFGNAERALVEVAHRLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQPNKPFVP 246
           LL+GNAERA+VEVA RL+ G  I  + D+RGTA      P  +  +DSTRID+P K    
Sbjct: 186 LLYGNAERAIVEVAQRLSWGHKIEDITDVRGTAFIRRDTPVGWYEVDSTRIDRPGKIDKI 245

Query: 247 SNPYEVETQ----CAT---KG--DEKEEAQPITIRPS-RHDAKTTAVRLPSFEKLVNDRI 296
            NPY V TQ    CA    KG  D+ EEA+ + I  S R     T +RLPS EK+ ND +
Sbjct: 246 INPY-VNTQDTQACAIEQEKGPQDDPEEAKVVQILASPRMTRDKTVIRLPSVEKVRNDAV 304

Query: 297 LYAHASRVLHLETNPYSGRALVQRHGDRELWVNQAPIPLTTEEMDFVFGLYYARVPHPKY 356
           LYAHA+RVLHLETNP + RALVQ+HG+ ++W N  PIP+TTEEMD+VFG+ YARVPHP Y
Sbjct: 305 LYAHANRVLHLETNPGNARALVQKHGEVDVWFNPPPIPMTTEEMDYVFGMPYARVPHPAY 364

Query: 357 GDAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESIINELKEIRDKVPGF 416
           G  KIPAYDMI+ SVNIMRGCFGGC+FCSITEHEGRIIQNRS+ESII E++EIRDKVPGF
Sbjct: 365 GKEKIPAYDMIRFSVNIMRGCFGGCTFCSITEHEGRIIQNRSEESIIREIEEIRDKVPGF 424

Query: 417 TGVISDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICHKLNTDHKHTIDLYRAARDVD 476
           TGVISDLGGPTANMYR+ C  P+ E+ CR+PSCVFPGIC  LNTDH   I LYR+AR + 
Sbjct: 425 TGVISDLGGPTANMYRIACKSPEIESACRKPSCVFPGICPNLNTDHSSLIQLYRSARALP 484

Query: 477 GIKKVVIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLSMMMKPGMGTYDR 536
           G+KK++IASG+RYDLA+ESPEYV+ELVTHHVGGYLKIAPEHTE+GPL+ MMKPG+G+YD+
Sbjct: 485 GVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTEEGPLNQMMKPGIGSYDK 544

Query: 537 FKELFEKYSAEAGKKQYLIPYFIAAHPGTEDEDMVNLALWLKSNNYRCDQVQNFYPSPMC 596
           FK +FEKY+ EAGK+QYLIPYFIAAHPGT DEDM+NLALWLK N +R DQVQ FYPSPM 
Sbjct: 545 FKRMFEKYTKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYPSPMA 604

Query: 597 NATAMYHAEVNPLKRVKYKKPEKVPVAKGEAQRRLHKALLRYHDPANWPMIREALIAMGK 656
            ATAMYH+  NPL++V YK  + V + K E QRRLHKA LRYHDP  WPM+REAL  MG+
Sbjct: 605 TATAMYHSGKNPLRKVTYKS-DAVTIVKSEEQRRLHKAFLRYHDPKGWPMLREALTRMGR 663

Query: 657 RHLIGDRPECLIP-------------EKDSDLVTPAQSRKSGRHGANRFATKHTHSQPGF 703
             LIG   + LIP              K+S   TPA S K  +    +  T+HT   P  
Sbjct: 664 ADLIGPGKDQLIPLHQPATDSYQSARRKNS---TPAGSHKVAKETTTKILTQHTGLPP-- 718

Query: 704 DALRGNKSGGQGRPNSGNKSNQGKPAGSKPTGSKPTANKPAGNQSARSEQNRGQQGQR 761
                    G    N  +K  Q K A           NK A  + A + + +G +  R
Sbjct: 719 --------RGSDGSNPWDKREQAKAAAQ-------ARNKQAAKERADAAKGKGGKPAR 761