Pairwise Alignments

Query, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 793 a.a., UPF0313 [4Fe-4S] protein YgiQ from Variovorax sp. SCN45

 Score =  914 bits (2361), Expect = 0.0
 Identities = 456/774 (58%), Positives = 564/774 (72%), Gaps = 66/774 (8%)

Query: 7   PIHHYKKYWAECFGTAPFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAIIGRLLE 66
           P++ Y+KYWA  FGTA FLPTSR+EMD LGWDSCD+I+VTGDAYVDHPSFGM++IGR+LE
Sbjct: 16  PLNSYRKYWAARFGTAKFLPTSRKEMDALGWDSCDIIVVTGDAYVDHPSFGMSVIGRMLE 75

Query: 67  AQGFRVGIIAQPEWQTKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDDAYTPNN 126
           AQGFRVGIIAQP+WQ+ + F  LGKPNLFFGVTAGNMDSMINRYTAD+KIR DDAYTP +
Sbjct: 76  AQGFRVGIIAQPDWQSAEPFKVLGKPNLFFGVTAGNMDSMINRYTADRKIRSDDAYTPGD 135

Query: 127 KGGMRPDRCSLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILLDAKADI 186
            GG RPDR ++VYSQRC+EA+ DVPI+LGGIE SLRR+AHYDYWSDKVRRSI++DAK D+
Sbjct: 136 VGGSRPDRAAIVYSQRCKEAWNDVPIILGGIEGSLRRIAHYDYWSDKVRRSIVVDAKCDL 195

Query: 187 LLFGNAERALVEVAHRLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQPNKPFVP 246
           LL+GNAERA+VE+AHRLA  E + +++D+RGTA    + PE +  I+ST +D+P +    
Sbjct: 196 LLYGNAERAIVEIAHRLAAKEPVQQIIDVRGTAFVRRETPEGWFEINSTSVDEPGRVEAH 255

Query: 247 SNPY----------------EVETQCATKGDE----------KEEAQPITIRP------- 273
            NPY                E E Q   K  E              +P+   P       
Sbjct: 256 VNPYLMVSEQAKANGATCAKEDEAQAVAKAAEAAGPAGGSVVNPAIKPLNFVPNPALQPR 315

Query: 274 ---SRHDAKTTAVRLPSFEKLVNDRILYAHASRVLHLETNPYSGRALVQRHGD----REL 326
              S      + +RLP++E++ +D +LYAHA+RVLHLETNP + RALVQ HG+    R++
Sbjct: 316 GKISVPPRDRSVIRLPAYEQVRSDPVLYAHANRVLHLETNPGNARALVQAHGEGATARDV 375

Query: 327 WVNQAPIPLTTEEMDFVFGLYYARVPHPKYGD--------AKIPAYDMIKTSVNIMRGCF 378
           W+N  PIPLTT EMD+VF L YAR PHP+Y D         KIPA++MI+ SVNIMRGCF
Sbjct: 376 WINPPPIPLTTAEMDYVFDLPYARSPHPRYADENGSHDGATKIPAWEMIRFSVNIMRGCF 435

Query: 379 GGCSFCSITEHEGRIIQNRSQESIINELKEIRDKVPGFTGVISDLGGPTANMYRLGCSDP 438
           GGC+FCSITEHEGRIIQ+RS++SII E++ IRD V GFTG ISDLGGPTANMYRLGC  P
Sbjct: 436 GGCTFCSITEHEGRIIQSRSEDSIIKEVEAIRDSVNGFTGTISDLGGPTANMYRLGCKSP 495

Query: 439 KAEANCRRPSCVFPGICHKLNTDHKHTIDLYRAARDVDGIKKVVIASGVRYDLAIESPEY 498
           + EA CR+PSCV+PGIC  L T+H   I +YR AR + GIKK++I SG+RYDLA++SPEY
Sbjct: 496 EIEAACRKPSCVYPGICPNLGTNHDPLIKIYRRARALRGIKKILIGSGLRYDLAVQSPEY 555

Query: 499 VRELVTHHVGGYLKIAPEHTEKGPLSMMMKPGMGTYDRFKELFEKYSAEAGKKQYLIPYF 558
           V+ELV HHVGGYLKIAPEHTE+GPL+ MMKPG+G+YD+FK++FEKYSAEAGKKQYLIPYF
Sbjct: 556 VKELVQHHVGGYLKIAPEHTEQGPLTKMMKPGIGSYDKFKQMFEKYSAEAGKKQYLIPYF 615

Query: 559 IAAHPGTEDEDMVNLALWLKSNNYRCDQVQNFYPSPMCNATAMYHAEVNPLKRVKYKKPE 618
           IAAHPGT DEDM+NLA+WLK N +R DQVQ FYPSPM  AT MYH   NPL+++  ++ E
Sbjct: 616 IAAHPGTSDEDMMNLAIWLKKNGFRADQVQTFYPSPMATATTMYHTNKNPLRKIT-RESE 674

Query: 619 KVPVAKGEAQRRLHKALLRYHDPANWPMIREALIAMGKRHLIGDRPECLIP--EKDSDLV 676
            V + +G+ +RRLHKA LRYHD  NWP++REAL +MG+  LIG+    LIP  +  +D  
Sbjct: 675 TVDIVRGDKRRRLHKAFLRYHDANNWPLLREALKSMGRADLIGNGKHHLIPTWQPLTDGG 734

Query: 677 TPAQSRKSG----------RHGANRFATKHTHSQPGFDALRGNKSGGQGRPNSG 720
             +  RK+           +    R  T+HT   P     R N SG   R ++G
Sbjct: 735 YTSARRKNSTAAPVKLAPVKPSKGRILTQHTGLPP-----RDNGSGPPSRKSAG 783