Pairwise Alignments

Query, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 784 a.a., putative enzyme of unknown function from Pseudomonas putida KT2440

 Score =  989 bits (2558), Expect = 0.0
 Identities = 506/785 (64%), Positives = 588/785 (74%), Gaps = 50/785 (6%)

Query: 7   PIHHYKKYWAECFGTAPFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAIIGRLLE 66
           P++ Y KYWAECFG APFLP SREEMD LGWDSCD+IIVTGDAYVDHPSFGMAIIGRLLE
Sbjct: 24  PLYDYPKYWAECFGPAPFLPMSREEMDLLGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLE 83

Query: 67  AQGFRVGIIAQPEWQTKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDDAYTPNN 126
           AQGFRVGIIAQP WQ+KD FM LG+PNLFFGV AGNMDSMINRYTADKKIR DDAYTP  
Sbjct: 84  AQGFRVGIIAQPNWQSKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDDAYTPGG 143

Query: 127 KGGMRPDRCSLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILLDAKADI 186
             G RPDR SLVYSQRC+EAYK VPIVLGGIEASLRR+AHYDYW DKVR SIL+DA ADI
Sbjct: 144 LAGSRPDRASLVYSQRCKEAYKHVPIVLGGIEASLRRIAHYDYWQDKVRHSILIDASADI 203

Query: 187 LLFGNAERALVEVAHRLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQPNKPFVP 246
           LLFGNAERA+VEVA RL+NGE I  + D+RGTA      P+ +  IDSTRID+P +    
Sbjct: 204 LLFGNAERAVVEVAQRLSNGEKIETITDVRGTAFVRRDTPQGWYEIDSTRIDRPGRVDKI 263

Query: 247 SNPYEVETQ----CA---TKGDEKE--EAQPITIRPSRHDAKTTAV-RLPSFEKLVNDRI 296
            NPY V TQ    CA    KGD+++  EA+ + I  S    +  +V RLPSFEK+ ND +
Sbjct: 264 INPY-VNTQDTQACAIEQAKGDQEDPNEAKVVQILDSPAVTREKSVIRLPSFEKVRNDPV 322

Query: 297 LYAHASRVLHLETNPYSGRALVQRHGDRELWVNQAPIPLTTEEMDFVFGLYYARVPHPKY 356
           LYAHA+RVLHLETNP + RALVQ+HG+ ++W N  PIP++TEEMD+VFG+ YARVPHP Y
Sbjct: 323 LYAHANRVLHLETNPGNARALVQKHGEVDVWFNPPPIPMSTEEMDYVFGMPYARVPHPAY 382

Query: 357 GDAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESIINELKEIRDKVPGF 416
           G  +IPAY+MI+ SVNIMRGCFGGC+FCSITEHEGRIIQNRS ESI++E++E+RDKVPGF
Sbjct: 383 GKERIPAYEMIRFSVNIMRGCFGGCTFCSITEHEGRIIQNRSHESILHEIEEMRDKVPGF 442

Query: 417 TGVISDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICHKLNTDHKHTIDLYRAARDVD 476
           TGV+SDLGGPTANMYR+ C  P+ E  CR+PSCVFPGIC  LNTDH   I+LYR AR + 
Sbjct: 443 TGVVSDLGGPTANMYRIACKSPEIEKYCRKPSCVFPGICENLNTDHSSLIELYRKARALP 502

Query: 477 GIKKVVIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLSMMMKPGMGTYDR 536
           G+KK++IASG+RYDLA+ESPEYV+ELVTHHVGGYLKIAPEHTE+GPL  MMKPG+GTYDR
Sbjct: 503 GVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTERGPLDKMMKPGIGTYDR 562

Query: 537 FKELFEKYSAEAGKKQYLIPYFIAAHPGTEDEDMVNLALWLKSNNYRCDQVQNFYPSPMC 596
           FK +FEK+S EAGK+QYLIPYFIAAHPGT DEDM+NLALWLK N +R DQVQ FYPSPM 
Sbjct: 563 FKRMFEKFSKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYPSPMA 622

Query: 597 NATAMYHAEVNPLKRVKYKKPEKVPVAKGEAQRRLHKALLRYHDPANWPMIREALIAMGK 656
           +ATAMYH+  NPL++V YK  E V + K + QRRLHKA LRYHDP  WPM+REAL  MG+
Sbjct: 623 SATAMYHSGKNPLRKVTYKS-EGVEIVKSDEQRRLHKAFLRYHDPKGWPMLREALQRMGR 681

Query: 657 RHLIGDRPECLIP--EKDSDLV--------TPAQSRKSGRHGANRFATKHTHSQPGFDAL 706
             LIG     LIP  +  +D          TPA S K G+    +  T+HT         
Sbjct: 682 ADLIGPGKHQLIPLHQPQTDTYQSARRKNSTPAGSHKVGKD--QKILTQHT--------- 730

Query: 707 RGNKSGGQGRPNSGNKSNQGKPAGSKP--TGSKPTANKPAGNQSARSEQNRGQQGQRGSA 764
                   G P  G+        GSKP     K  A   A NQ A  E+    +G +G+ 
Sbjct: 731 --------GLPPRGSD-------GSKPWDKREKAKAEAFARNQQAAKERKEASKGGKGNK 775

Query: 765 TGGKP 769
              +P
Sbjct: 776 KPRQP 780