Pairwise Alignments

Query, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 739 a.a., YgiQ family radical SAM protein from Escherichia coli ECRC62

 Score =  976 bits (2523), Expect = 0.0
 Identities = 475/727 (65%), Positives = 573/727 (78%), Gaps = 11/727 (1%)

Query: 11  YKKYWAECFGTAPFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAIIGRLLEAQGF 70
           + +YWA CFG APFLP SREEMDQLGWDSCD+I+VTGDAYVDHPSFGMAI GR+LEAQGF
Sbjct: 16  WPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGF 75

Query: 71  RVGIIAQPEWQTKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDDAYTPNNKGGM 130
           RVGIIAQP+W +KD FM LGKPNLFFGVTAGNMDSMINRYTAD+++RHDDAYTP+N  G 
Sbjct: 76  RVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGK 135

Query: 131 RPDRCSLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILLDAKADILLFG 190
           RPDR +LVY+QRC+EA+KDVP++LGGIEASLRR AHYDYWSD VRRS+L+D+KAD+L+FG
Sbjct: 136 RPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFG 195

Query: 191 NAERALVEVAHRLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQPNKPFVPSNPY 250
           N ER LVEVAHRLA GE I+++ D+R TA+ + +    +  +DSTR+D P K     +PY
Sbjct: 196 NGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPY 255

Query: 251 EVETQCATK---GDEKEEAQPITIRPSRHDA-KTTAVRLPSFEKLVNDRILYAHASRVLH 306
             +  CA       +K+EA+ +T++P R    + T V LPSFEK+  D++LYAHASR+LH
Sbjct: 256 GEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILH 315

Query: 307 LETNPYSGRALVQRHGDRELWVNQAPIPLTTEEMDFVFGLYYARVPHPKYGDAKIPAYDM 366
            ETNP   RAL+Q+HGDR +W+N   IPL+TEEMD VF L Y RVPHP YG+A+IPAY+M
Sbjct: 316 HETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEM 375

Query: 367 IKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESIINELKEIRDKVPGFTGVISDLGGP 426
           I+ SVNIMRGCFGGCSFCSITEHEGRIIQ+RS++SIINE++ IRD VPGFTGVISDLGGP
Sbjct: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435

Query: 427 TANMYRLGCSDPKAEANCRRPSCVFPGICHKLNTDHKHTIDLYRAARDVDGIKKVVIASG 486
           TANMY L C  P+AE  CRR SCV+P IC  ++T+H+ TI+LYR ARD+ GIKK++IASG
Sbjct: 436 TANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASG 495

Query: 487 VRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLSMMMKPGMGTYDRFKELFEKYSA 546
           VRYD+A+E P Y++EL THHVGGYLKIAPEHTE+GPLS MMKPGMG+YDRFKELF+ YS 
Sbjct: 496 VRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555

Query: 547 EAGKKQYLIPYFIAAHPGTEDEDMVNLALWLKSNNYRCDQVQNFYPSPMCNATAMYHAEV 606
           +AGK+QYLIPYFI+AHPGT DEDMVNLALWLK + +R DQVQNFYPSP+ N+T MY+   
Sbjct: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615

Query: 607 NPLKRVKYKKPEKVPVAKGEAQRRLHKALLRYHDPANWPMIREALIAMGKRHLIGDRPEC 666
           NPL ++ YK  E V V KG+ QRRLHKALLRYHDPANWP+IR+AL AMGK+HLIG R +C
Sbjct: 616 NPLAKIGYKS-EDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674

Query: 667 LIPEKDSDLVTPAQSRKSGRHGANRFATKHT--HSQPGFDALRGNKSGGQGRP-NSGNKS 723
           L+P    + +  A+ +      A    TKHT   +Q    A     S  Q RP N+G K 
Sbjct: 675 LVPAPTIEEMREARRQNRNTRPA---LTKHTPMATQRQTPATAKKASSTQSRPVNAGAKK 731

Query: 724 NQGKPAG 730
                 G
Sbjct: 732 RPKAAVG 738