Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  206 bits (525), Expect = 3e-57
 Identities = 156/544 (28%), Positives = 262/544 (48%), Gaps = 15/544 (2%)

Query: 130 ALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQ 189
           A+FD    GV++TD +  I+  NR F + TGY + +++G + S+F SG+HS +FY  M+Q
Sbjct: 88  AVFDCTREGVLVTDTKGLIVHVNRAFMEITGYSREDVMGRQPSLFKSGRHSSNFYQQMFQ 147

Query: 190 QLREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQI-FYIGFTTDLAPHLDRVLD-KQ 247
            L   G WSG I ++R SGE++PQ  +I+ +   +GQ+  Y+   +D++   D   +   
Sbjct: 148 SLERTGEWSGEIWNRRKSGEIYPQWQTIRVIHDDQGQVSHYVAVFSDISAIKDSEHELAH 207

Query: 248 AGDVELLTQLPTLSKFSDQLKQRLPKQQT-TTGFVLAIQP----KFSSDKYYAQIRRLAA 302
               + LT LP    F+D+ +Q L   QT   G  L +      K  +D     +     
Sbjct: 208 LAHHDPLTDLPNRLLFTDRAEQALASAQTHKRGCALLLLDLDHFKIINDSLGHNVGDQLL 267

Query: 303 SLAQNRQVQLCGYHGEGIFLCQLDAEK---NLEAQPLVGLQRTLRQFFIE-LRQRGGQEA 358
            L   R   L    G G+ L +L  ++     E+ P V     L Q  ++ ++Q    + 
Sbjct: 268 KLVGER---LKALFGPGVTLARLGGDEFAVLAESCPQVAQAAGLAQRMLDAMKQPFIFDG 324

Query: 359 HQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERRKTL 418
           HQ      +G+S+   D    E+L+ +A  A+ +  +        Y   +    + R  +
Sbjct: 325 HQLFISASIGISLFPSDALSAEQLLRNADSALFKAKSAGREGYALYTEELTAHAQNRVEI 384

Query: 419 EKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAEDLGLI 478
              +++ +   ++ V+YQP+ D     ++  EAL R+Q PE       E I IAE  GLI
Sbjct: 385 ASELRRALEQQELCVYYQPVHDLNDSRLIGVEALVRWQHPERGLVPPGEFIPIAERTGLI 444

Query: 479 NQLDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLAETPTLAKN 538
             +D  +  +A + +    A       ++IN S +   +  ++ + V  +L +T      
Sbjct: 445 ADIDAWVMNQACRQMCDWLAQGTPLSFIAINVS-SRLFARRELYEQVAQVLHDTGLDPAF 503

Query: 539 ITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKIDREF 598
           + +E+TE+A  +      E L  LR  G+ +AIDDFGTG+SS   L       LKID+ F
Sbjct: 504 LELEVTESAVMEDPEVALEQLHRLRELGLRLAIDDFGTGYSSLLRLKRLPVQKLKIDQGF 563

Query: 599 VTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFAKPLP 658
           V  +       AIV++V  LA ++G++V AEG+E   +   L     DL QG++F +P+P
Sbjct: 564 VAGLPWDEDDAAIVRVVIALAKSMGMQVHAEGIEQREQARFLLDQQCDLGQGYWFGRPVP 623

Query: 659 LSNL 662
              +
Sbjct: 624 AGEI 627