Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  188 bits (478), Expect = 1e-51
 Identities = 152/543 (27%), Positives = 249/543 (45%), Gaps = 23/543 (4%)

Query: 131  LFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQQ 190
            +F+N   GV+ITD   RI A NR F + TGY + E LG    +  SG+H   FY+ MW Q
Sbjct: 687  VFENTAEGVLITDIDQRISAVNRAFSEITGYSEIEALGQTPRLLASGQHDSAFYLAMWHQ 746

Query: 191  LREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQI-FYIGFTTDLAP--HLDRVLDKQ 247
            L  +G W G I ++R +GE++P  L+I  +     +I  ++    D++   H    LD Q
Sbjct: 747  LTAEGHWQGEIYNKRKNGELYPSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQ 806

Query: 248  AGDVELLTQLPTLSKFSDQLKQRLPKQQTTT--GFVLAIQP---KFSSDKYYAQIRRLAA 302
            A   + LT LP  + F ++L+  L   Q +   G VL +     K  +D     +  L  
Sbjct: 807  AHH-DPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLL 865

Query: 303  S-LAQN-----RQVQLCGYHGEGIFLCQLDA-EKNLEAQPLVGLQRTLRQFFIELRQRGG 355
              +AQ      R V      G   F+  L    K  +A  +      L   F    Q G 
Sbjct: 866  KGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDASTIAN---KLLACFNAPFQAG- 921

Query: 356  QEAHQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERR 415
               H+      +G+S+   D   +  L+ +A  AM    A     +  Y R +  Q   R
Sbjct: 922  --EHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQASER 979

Query: 416  KTLEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAEDL 475
              LE  +++ +   ++ + +QP +  ++ S+V  EAL R+  P       +  I +AE+ 
Sbjct: 980  IALEHELRRAVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAEEN 1039

Query: 476  GLINQLDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLAETPTL 535
            G I QL + +  +A + +      +     +SIN +  + L    + + +  +L      
Sbjct: 1040 GTILQLGDWVLEQACRQMQAWKQHYQPFGPLSINLA-GAQLRHPHLARRIEQLLKHHQLK 1098

Query: 536  AKNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKID 595
            A ++ +E+TE        +   VL  L+  GV +AIDDFGTG+SS SYL     D LKID
Sbjct: 1099 AGDLQLEITENFIMSQAEEALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKID 1158

Query: 596  REFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFAK 655
            + F+  +       AI + +  L  ++ + ++AEGVE + +   L + G + +QG+  + 
Sbjct: 1159 KSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSL 1218

Query: 656  PLP 658
            PLP
Sbjct: 1219 PLP 1221