Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  202 bits (515), Expect = 4e-56
 Identities = 160/548 (29%), Positives = 269/548 (49%), Gaps = 23/548 (4%)

Query: 130 ALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQ 189
           A+FD+   GV++TD Q  I+  NR F + TGYQQ+E++G + S F SG H   FY +++ 
Sbjct: 89  AVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLAFYQEVFA 148

Query: 190 QLREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQI-FYIGFTTDLAP--HLDRVLDK 246
            L E+G WSG I ++R SGE++PQ  +I  +   +G++  Y+   +D++   H ++ L  
Sbjct: 149 TLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISAIKHSEQELAY 208

Query: 247 QAGDVELLTQLPTLSKFSDQLKQRLPKQQTTT-GFVLAIQPKFSSDKYYAQIRRLAASLA 305
            A   + LT LP    F+D+L+Q L   Q    G  L +        ++  I        
Sbjct: 209 LAHH-DPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDL----DHFQSINDGLGHTI 263

Query: 306 QNRQVQLCGYH-----GEGIFLCQLDAEKN---LEAQPLVGLQRTLRQFFIE-LRQRGGQ 356
            ++ ++L G       G G+ L +L  ++    +E    VG    L Q  IE +R+    
Sbjct: 264 GDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREPFQF 323

Query: 357 EAHQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERRK 416
           + ++      +G+S+   D    E+L+ +A  A+ +  +        Y   +    + R 
Sbjct: 324 DGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHAQHRV 383

Query: 417 TLEKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAEDLG 476
                +++ +   ++ V++QP+ D  S   V  E L R+Q P        E I IAE  G
Sbjct: 384 ETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAERTG 443

Query: 477 LINQLDELIGGKALKDLPKIHALFGH--HVGVSINRSLNSDLSAEQILQSVVDMLAETPT 534
           LI ++D  +  +A + + +  A       VGV+I+  L       ++ + V ++L +T  
Sbjct: 444 LIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRL---FGQHELYRQVAEVLHDTGL 500

Query: 535 LAKNITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKI 594
               + +E+TE+A  +      E L  LR  GVT+AIDDFGTG+SS   L       LKI
Sbjct: 501 APALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKI 560

Query: 595 DREFVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFA 654
           D+ FV  + V     AIV+++  LA ++G++V AEG+E   +   L      L QG++F 
Sbjct: 561 DQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFG 620

Query: 655 KPLPLSNL 662
           +P+P  +L
Sbjct: 621 RPVPAEDL 628