Pairwise Alignments

Query, 818 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 830 a.a., two-component system response regulator from Magnetospirillum magneticum AMB-1

 Score =  184 bits (466), Expect = 2e-50
 Identities = 138/545 (25%), Positives = 258/545 (47%), Gaps = 19/545 (3%)

Query: 131 LFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHSQHFYVDMWQQ 190
           +F++   G+ +TD++ +I+  N  F + TGY  +E++G       SG+H+  FY  +++ 
Sbjct: 273 VFESTGEGLFVTDEKRQIIHVNPAFTELTGYPADEVIGRTPKFLASGRHTPEFYDAVFKT 332

Query: 191 LREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIF-YIGFTTDLAPHL--DRVLDKQ 247
           L E G W G I ++R +GE++ + L+I  +  ++G++  Y+   +D+      +  L+ Q
Sbjct: 333 LAECGKWQGEIWNRRKTGEMFAEWLNISVVRNERGELTNYVAVFSDITSRKQDEERLNYQ 392

Query: 248 AGDVELLTQLPTLSKFSDQLKQRLPKQQTTTGFVLAIQPKFSSDKYYAQIRRLAASLA-- 305
           A   + LT+LP  + F ++L + L +       V  +   F    ++ Q+      LA  
Sbjct: 393 ANH-DPLTRLPNRTLFQERLTRALTRAHRNQAIVALL---FIDLDFFKQVNDTLGHLAGD 448

Query: 306 ---QNRQVQLCGYHGEGIFLCQLDAEKNLEAQPLVGLQR----TLRQFFIELRQRGGQEA 358
              Q    +L     +G  + +L  ++       +   R       +    L +    + 
Sbjct: 449 ILLQQVAERLTSCVRQGDTVARLAGDEFTVILEEISEPRDGAVVAHKILSLLAEPFDLQG 508

Query: 359 HQAVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERRKTL 418
           H+A     +GV++   D    + L+  A  AM            F+  +I+ Q   R  L
Sbjct: 509 HEARISSSIGVALYPSDGGDAQTLIKLADAAMYRAKHQGRNACRFHSESINAQAFERLAL 568

Query: 419 EKWVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAEDLGLI 478
           E  ++  +   +  + YQPI D++S SVV  EAL R++ P+       + + +AE+ GLI
Sbjct: 569 ESALRHAVERREFLLHYQPIFDARSGSVVAVEALLRWRHPDFGMIMPNQFLPLAEETGLI 628

Query: 479 NQLDELIGGKALKDLPKIHALFGHHVGVSINRSLNS-DLSAEQILQSVVDMLAETPTLAK 537
             + + +  +A +       L   H G+ +  +L+S  L A ++++ +   L  +     
Sbjct: 629 MPVGKFVLDEACRQAKA--WLDAGHTGLKVGINLSSRQLRAPELIEDIAAALEGSGLPPS 686

Query: 538 NITVELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKIDRE 597
            + +++ E+A  D       +    +  GV +AID FG+G+SSF++L +   + LKID+ 
Sbjct: 687 ALELDVPESAIIDKGQDVDAIFTQFKTLGVRMAIDAFGSGYSSFAFLRKLPSNTLKIDQG 746

Query: 598 FVTNIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFAKPL 657
           FV +   G+    IV  +  +A  L + VVA G+ETE ++  L     D++QGF FA P+
Sbjct: 747 FVRDAASGAEESEIVTAIVAVARGLHLSVVAPGIETEEQLAHLVKYDCDMVQGFLFAHPM 806

Query: 658 PLSNL 662
           P   L
Sbjct: 807 PAEEL 811



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 128 FDALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNEL 166
           F ALFDN   GV+++D     + CN  F    GY   EL
Sbjct: 146 FRALFDNAGTGVILSDAAGAYIHCNPAFCTMVGYSDAEL 184