Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 5/256 (1%)

Query: 2   IELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTAE 61
           +E K L++ + +   G  T    SLH++QSA+S Q+  LE  +G  L  R    +R TA 
Sbjct: 1   MEFKQLRSFVEVIHRGGFTQAGKSLHISQSAVSKQVAQLEQSLGTPLLERTGSHIRLTAA 60

Query: 62  GEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPNV 121
           GE++L+ A+ +L   +   +EL  +++   G L + +   +          EY+  +PNV
Sbjct: 61  GEVVLQRAEAMLRLQTELLSELDDMQQLTRGELRLGLPLLAGDTLFAGLFAEYRRRYPNV 120

Query: 122 ALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHY--EPLFDFEMRLITATNHPLADK 179
            +    G       A+L GELD+      L  S+  +  +   D  +  +   +HPLA  
Sbjct: 121 TIQLLEGGSRTIEQAILNGELDV---GGCLNSSDPAFARQAFCDEPLDALLPMDHPLAQN 177

Query: 180 AGIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVA 239
           A +  ++LAD   L Y       D +    Q  G  P    ++     L  +V+AG GV 
Sbjct: 178 AQVRLEELADTPFLMYQRSFVLNDRLIQACQQVGFTPREIGRSGQADFLAALVAAGQGVV 237

Query: 240 ALPNWAISEFSRQGLI 255
            LP+       R G++
Sbjct: 238 LLPSVVARGLLRPGVV 253