Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 14/297 (4%)

Query: 2   IELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRK-TRPVRFTA 60
           I  + L+  ++  + GS++A A  +H++  ++S  I  +EA +G QLF+R   + +  TA
Sbjct: 5   ITQRQLEYFVASGEAGSISAAAERIHVSSPSISAAITHMEAELGIQLFIRHHAQGISLTA 64

Query: 61  EGEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQV---- 116
            G ++++ A  IL +M+      +     V G L +      C + L P +    V    
Sbjct: 65  VGRLVMQEAKLILEQMTNLYTIASESLNTVRGPLRVG-----CLESLAPMITPELVFGFG 119

Query: 117 -SWPNVALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHP 175
            ++P V L  + G   E L  L +GELD+ +T D++  +++ ++PL      ++    HP
Sbjct: 120 RAFPGVRLTQAEGNHEELLEKLRSGELDIALTYDLVTSADIDFQPLAQLPPYVMVGEYHP 179

Query: 176 LADKAGIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAG 235
           LA+   +  QDL    ++       R   +  F+Q AG  P    ++ N   +  MV  G
Sbjct: 180 LANSPAVSMQDLEAYPVVLLDTPWSRDYFLSLFIQ-AGTTPNIIMRSTNLETVRAMVGNG 238

Query: 236 LGVAALPNWAISEFSRQG--LITSKPLGKGLWRRLFAATRHSEKDKRYLQAFFATAR 290
           +G +       S  S+ G  +I  +  G     RL  AT  + +  R + AF    R
Sbjct: 239 IGYSFANARPKSNLSQDGKRVIRLRLAGAHRPMRLGYATASNTQLSRVVSAFAERCR 295