Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 75/265 (28%), Positives = 115/265 (43%), Gaps = 5/265 (1%)

Query: 2   IELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTAE 61
           ++L +L   I++ +TGS +     LHLTQ A+S +I  LE ++  +LF R  R V  T  
Sbjct: 1   MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVGLTEA 60

Query: 62  GEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPNV 121
           G  LL  A  IL  +      L +L  +V+GRL +A   H     L P LR +   +PNV
Sbjct: 61  GRALLPRAYQILNVLDDTRRALTNLTGEVSGRLTLATSHHIGLHRLPPVLRTFTREYPNV 120

Query: 122 ALDFSSGFGFEPLPALLAGELDL-VITSDILPRSEVHYEPLFDFEMRLITATNHPLADKA 180
           ALD            +L G  ++ VIT    P + V   P++D  +  + A  H L    
Sbjct: 121 ALDIQFLDSEVAYEEILHGRAEVAVITLAPDPHNLVRATPVWDDPLDFVVAPEHSLISNG 180

Query: 181 GIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAA 240
            +   D+A    +          +V    +  G+ P      +    +  MVS GL  + 
Sbjct: 181 SVSLADIAGHPAVFPGGNTFTHHIVSRLFEAQGLTPNIAMSTNYLETIKMMVSIGLAWSV 240

Query: 241 LPNWAISE----FSRQGLITSKPLG 261
           LP   + E     +  G+  S+ LG
Sbjct: 241 LPRTMLDEQVASIALPGIQLSRQLG 265