Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 9/248 (3%)

Query: 1   MIELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTA 60
           MIE + L+  I++ +       A  LH+ Q  LS  I  LE ++G  L LR  R VR TA
Sbjct: 1   MIETRLLRQFIAVAEELHFHKAAQRLHMAQPPLSQAINRLEEKLGFGLLLRNKRGVRLTA 60

Query: 61  EGEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPN 120
            G   L  A   L ++ +      ++   V+G+L +     + +  L+  LR ++ ++PN
Sbjct: 61  AGAAFLDTAYRTLAELEQGIEYARNVSAGVSGKLTITAISIAYYDSLLNRLRRFRETYPN 120

Query: 121 VALDFSSGFGFEPLPALLAGELDLVITSDI-LPRSEVHYEPLFDFEMRLITATNHPLADK 179
           V L            ALLAGE D+     + LP   +    L D ++ +    +HP+A  
Sbjct: 121 VQLTIREMPSASQAKALLAGEADIGFMRRLPLPVGTLEARLLLDEQIVMALPASHPMARF 180

Query: 180 AGIEPQDLADQTMLTYPVQKQRLDVVKH-----FLQPAGVEPARWKQADNTLMLVQMVSA 234
             ++ ++ AD+  +  P   Q L    H       + AG  P   ++A     L+ +V+ 
Sbjct: 181 EAVDLREFADEDFVFTP---QALGGGYHAQLVALCESAGFYPKVVQEAAQIHTLLGLVAC 237

Query: 235 GLGVAALP 242
           G GVA +P
Sbjct: 238 GFGVALVP 245