Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

 Score =  303 bits (776), Expect = 3e-87
 Identities = 150/305 (49%), Positives = 212/305 (69%), Gaps = 1/305 (0%)

Query: 1   MIELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTA 60
           MI+L+HL+TL +LR+T SL   A  LHLTQSALSHQ +D+E RIG  LF+RK+RPVRFT+
Sbjct: 1   MIDLRHLRTLHALRETDSLHEAAERLHLTQSALSHQFRDMEERIGTPLFVRKSRPVRFTS 60

Query: 61  EGEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPN 120
            G  LL+LAD +LP++   E +L  L     GRLH+AIECHSC+QWLMP++ E++ +WP 
Sbjct: 61  AGLKLLQLADQVLPQIRNTERDLGKLAGGCAGRLHIAIECHSCYQWLMPSVDEFRGAWPE 120

Query: 121 VALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADKA 180
           V LD +SGF F PLPAL  G+LDLV+TSD +    + Y PLF +E  L    +H +  K 
Sbjct: 121 VELDLASGFSFAPLPALERGDLDLVVTSDPVTLPGISYVPLFSYEALLAIDNHHAMRHKP 180

Query: 181 GIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAA 240
            +EP D+A QT++TYP+++ RLD+   FL PA VEPA+ + ++ T+M++Q+V++G GV  
Sbjct: 181 YLEPADIASQTLITYPIERTRLDIFTRFLDPADVEPAQVRTSELTVMMMQLVASGRGVCC 240

Query: 241 LPNWAISEFSRQGLITSKPLGK-GLWRRLFAATRHSEKDKRYLQAFFATARQQCKSHLDG 299
           LPNWA+ E+S +G +T+K LG+ GL   L+AA R    +  Y++ F  TA+    + L G
Sbjct: 241 LPNWAVHEYSSRGYVTAKRLGEHGLQANLYAALRSDMLEVPYMRDFLLTAKDISFTTLAG 300

Query: 300 IKMAS 304
           + +AS
Sbjct: 301 VSVAS 305