Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 6/257 (2%)

Query: 3   ELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTAEG 62
           EL+ +++ + + + GS    A +LHL+Q ALS +IK LE  +G  L  R TR V  T+ G
Sbjct: 4   ELQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVG 63

Query: 63  EILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPNV- 121
              L  A  +L     +   +  L E   G++ +A    + F +L   +R+Y   +P + 
Sbjct: 64  RDFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYPKIR 123

Query: 122 --ALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADK 179
              LD S+  G E   A+L GE D  I        ++ +  L      L    +HPLA++
Sbjct: 124 IRLLDLSANDGLE---AVLRGEADFGINMMSGQHPDIEFVSLVQEHFVLACRRDHPLANR 180

Query: 180 AGIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVA 239
           A +   +LAD  ++          ++ H L    + P  + +  +    + MV AGLGV+
Sbjct: 181 ASVTWTELADYRLIGVGRLSGNRMLLDHALSGLNLRPKWFYEVQHLSTSLGMVEAGLGVS 240

Query: 240 ALPNWAISEFSRQGLIT 256
           A+P+ A+       L++
Sbjct: 241 AMPSLAMPNADHPTLVS 257