Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

 Score =  311 bits (798), Expect = 9e-90
 Identities = 153/301 (50%), Positives = 210/301 (69%), Gaps = 1/301 (0%)

Query: 1   MIELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTA 60
           M+E++HLKTL +LR+  SL   A  LHLTQSALSHQ K+LE R+G  +F+RKT+P+RFT+
Sbjct: 1   MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTS 60

Query: 61  EGEILLRLADDILPKMSRAENELASLKEDVNGRLHMAIECHSCFQWLMPALREYQVSWPN 120
            G  LL+LAD  LP +  AE ++A L     GRLHMAIECHSCFQWLMP + +++ +WP 
Sbjct: 61  AGLRLLQLADATLPLLRSAERDIARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPE 120

Query: 121 VALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADKA 180
           V LD +SGF F PLPAL  G+LDLV+TSD +  + + Y PLF +E  L  A  HPLA K 
Sbjct: 121 VELDLASGFAFAPLPALARGDLDLVVTSDPVDLAGITYVPLFTYEAMLAVANQHPLASKP 180

Query: 181 GIEPQDLADQTMLTYPVQKQRLDVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLGVAA 240
            I PQDL DQT++TYPV++ RLD+   FL+PA +EPA  + ++ T+M++Q+V++G GV  
Sbjct: 181 YIVPQDLLDQTLITYPVERDRLDIFTRFLEPADIEPAAVRTSELTVMMMQLVASGRGVCG 240

Query: 241 LPNWAISEFSRQGLITSKPLG-KGLWRRLFAATRHSEKDKRYLQAFFATARQQCKSHLDG 299
           +P+WA+ E+S +G +  K LG KGL+  L+AA R    D  Y++ F  TA+    + LDG
Sbjct: 241 MPHWALHEYSSRGYVKGKRLGEKGLFATLYAAVRTDMLDAPYMRDFLLTAKDTSFATLDG 300

Query: 300 I 300
           +
Sbjct: 301 V 301