Pairwise Alignments

Query, 305 a.a., HTH-type transcriptional regulator MetR from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism (NCBI) from Escherichia coli BW25113

 Score = 84.0 bits (206), Expect = 4e-21
 Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 7/247 (2%)

Query: 2   IELKHLKTLISLRDTGSLTATATSLHLTQSALSHQIKDLEARIGGQLFLRKTRPVRFTAE 61
           +EL+HL+  +++    + T  A  LH +Q +LS QI+DLE  +G  L +R  R V  TA 
Sbjct: 1   MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60

Query: 62  GEILLRLADDILPKMSRAENELASLKEDV--NGRLHMAIECHSCFQWLMPALREYQVSWP 119
           GE  L+   D L  + +AEN     ++ V  + +L +     +    L   L  +++  P
Sbjct: 61  GECFLQ---DALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQP 117

Query: 120 NVALDFSSGFGFEPLPALLAGELDLVITSDILPRSEVHYEPLFDFEMRLITATNHPLADK 179
           +  ++  S    +    +  GELD+ +    +   E+ Y  LFD  + ++   +HPLA +
Sbjct: 118 DTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHE 177

Query: 180 AGIEPQDLADQTML-TYPVQKQRL-DVVKHFLQPAGVEPARWKQADNTLMLVQMVSAGLG 237
             I    L     + T PV    L  +VK +      +P   + A N L+ + +V  GLG
Sbjct: 178 KEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLG 237

Query: 238 VAALPNW 244
           V  +P +
Sbjct: 238 VTLIPGY 244