Pairwise Alignments

Query, 215 a.a., YdcF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Protein ydcF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 35/220 (15%)

Query: 20  QQPNVADLILVLGSNDVRVAEHAAKLYHQGLAPYVLFSGGFGRFTQGVF----NHNEAET 75
           +QP  +D +++ G+  +   + A ++      P +L SGG G  T  ++     H    T
Sbjct: 32  EQPYSSDCVVLAGNAVIPTIDAACRIAKAQGVP-LLISGGIGHSTPFLYAVIARHPRYHT 90

Query: 76  F-------AAIAKDAG-----VPEHAILLETQSTNSGENLHFSHQLLVQQARPAKRILLV 123
                   AAI  D       +P   I LE +STN GEN  FS  L+ Q        ++V
Sbjct: 91  IRTSGRAEAAILADIANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVV 150

Query: 124 QKPYMERRAYATFMQ------------QWPESVESVQVTSPAGSFFDYLTSELTSDFVLN 171
           Q P M+RR  A F +             +P  V  ++  +    F +      T +  L+
Sbjct: 151 QDPTMQRRTIAAFRRVTNDDTDAPRWLSFPGFVPVLRHLNDGTRFANVEEGIWTVERYLS 210

Query: 172 AMLGDFERIRD----YPALG--FQITQPIPEPVMQAYQAL 205
            + G+  R+RD    Y   G  F I   IP  +  A+Q L
Sbjct: 211 LIAGELPRLRDDETGYGPRGKDFIIHVDIPRDIENAWQVL 250