Pairwise Alignments

Query, 280 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., putative inner membrane protein from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 57/274 (20%), Positives = 116/274 (42%), Gaps = 40/274 (14%)

Query: 2   EHNQFDSLLPPQMA---ERAAITGEGKAKKAAYKSFLLAISAGIQIGIAFV----FYTVV 54
           E  +     PP+ A   E     G+ + ++     +  A++AG+ +G++ +    FY  +
Sbjct: 16  EEQEVSHSQPPRAAVLHEIIRYQGDQELERTLAALWWSALAAGLSMGLSLMAMGLFYARL 75

Query: 55  TTGAHDMPYGVTKLLGGLAFSLGLILVVITGGELFTSSVL---ILVAKASGKISWKELVR 111
             GA        +++  + +S G + V++   +LFT + L   + V  A    ++  L+R
Sbjct: 76  PEGAG------AQVVASIGYSAGFLAVILARQQLFTENTLTAVLPVMTAPTLANFGRLLR 129

Query: 112 NWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCN 171
            W VV  GNL G++++ ++ML    F     +  +  + + +  + +   Q FA G++  
Sbjct: 130 LWGVVLLGNLAGTLLVAWVMLELPIF---DSKTDVAFLEVGRKVMKNDISQMFAKGIVSG 186

Query: 172 ILVCLAVWMTFSARSLTDKVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYFAPESFW 231
            ++   VWM  S      K+ ++++   +     F H +    +V   +          W
Sbjct: 187 WMIATMVWMIPSMEHA--KIWIILMITYLMALGDFTHIVVGSVEVSYLV----------W 234

Query: 232 AMTGANIAQYADLNFVNFIVNNLIPVTLGNIVGG 265
           A          D  +  F +   +P   GNI+GG
Sbjct: 235 A---------GDETWSRFWLEFALPTLAGNIIGG 259