Pairwise Alignments

Query, 820 a.a., trimethylamine-N-oxide reductase TorA from Vibrio cholerae E7946 ATCC 55056

Subject, 798 a.a., putative dimethyl sulfoxide reductase chain YnfF from Escherichia coli ECRC62

 Score =  248 bits (633), Expect = 1e-69
 Identities = 231/868 (26%), Positives = 377/868 (43%), Gaps = 143/868 (16%)

Query: 3   ITRRSFLK-----GVATTSAASIIGPSLLTSVSAQAAETTGTWKVSGSHWGA---FRAHI 54
           I+RRS +K      +A  S+A  +  S +   +    E    W     + G+    R H+
Sbjct: 5   ISRRSLMKTSALGSLALASSAFTLPFSQMVRAAEVPVEEKAVWSSCTVNCGSRCLLRLHV 64

Query: 55  YGGKVQELKALELDTHPTEMLNG-----------IQGILYSPSRVRYPMVRLDWLKKHKY 103
              K   +  +E DT   ++              I+  +  P R++YPM R+        
Sbjct: 65  ---KDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVG------- 114

Query: 104 SAETRGNNRFIRVTWDEAIDLFYRELERVQKQYGPWALHA----GQTGWNQTGAFHNCTA 159
               RG  +F R++WDEA+D     L R+ K YG  A+H     G  G N T +      
Sbjct: 115 ---KRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNS-----N 166

Query: 160 MMQRAVGMHGNYITKVGDYSTGAGQTIMPYVLGSTEVYAQGTSWSEILDNSDNIILWAND 219
           +  R +   G ++++ G YST      M Y+ G+ +    G S  +I  N+  ++++ N+
Sbjct: 167 VPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGAND----GNSPDDIA-NTKLVVMFGNN 221

Query: 220 PVKNLQVGWNCETHQSFG----YLDQLKEKVAKGEINVVSVDPVKNKTQRFLQNDHLYIN 275
           P          ET  S G    Y++Q +E+       ++ +DP  N T    +++ L I 
Sbjct: 222 PA---------ETRMSGGGVTYYVEQARER---SNARMIVIDPRYNDTAAGREDEWLPIR 269

Query: 276 PQTDVAFMLALAHVLYTENLYDKKFIETYCLGFEE------------FIPYVLGKSKDKV 323
           P TD A   A+A VL TEN+ D+ F++ YC+G++E            +  Y+LG+  D +
Sbjct: 270 PGTDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEGPDGI 329

Query: 324 EKTPEWAATICGVKPDAIRDFARMLVNGRTQLLF-GWCIQRQEHGEQPYWMGAVLAAMIG 382
            KTPEWAA I  +  + I   AR + + +   +  GW  QR  +GEQ     A+L+ + G
Sbjct: 330 AKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAMLSVLTG 389

Query: 383 QIGLPGGGISYGHHYSGIGVPSTGFAGPGGFPRNLDQGAKPKWDNNDFNGYSRTIPVARW 442
            +G+ GG          +GV                     +W     N     I V  W
Sbjct: 390 NVGINGGNSGVREGSWDLGV---------------------EWFPMLENPVKTQISVFTW 428

Query: 443 IDAILEPGKKINHNGNTVT------LPGFKMMVISGCNPWHHHQDRNKMKRAFQ---KLE 493
            DAI + GK++    + V       +P   +   +     + H D N      Q   K E
Sbjct: 429 TDAI-DHGKEMTATRDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVLQDDSKCE 487

Query: 494 TVVTIDFSWTATCRFSDIVLPACTQWERNDIDSYGSYSGKGLIAMHR-LVDPLFQSRTDF 552
            +V ID   TA+ ++ DI+LP     E+ D+ S+ S    G + + +      F+ +  +
Sbjct: 488 MIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIY 547

Query: 553 EIMTELTRRFGRE--KEYTRGMDEMEWVRSLYDECKKANEGKFAMPEFEEFWEKGFLDFG 610
            +++E+ +R G +  + +T G  + EW++ L+ + K+ N     MP++EE    G   F 
Sbjct: 548 WMLSEVAKRLGPDVYQTFTEGRSQHEWIKYLHAKTKERNP---EMPDYEEMKTTGI--FK 602

Query: 611 TGTP---WVRHADFRKDPEINALGTPSGFIEITSRKIGRYGYEHCQEHPMW-FEKTERSH 666
              P   +V    FR+DP+ N L TPSG IEI S ++ +           W  +K E  H
Sbjct: 603 KKCPEEHYVAFRAFREDPQANPLKTPSGKIEIYSERLAKIA-------DTWELKKDEIIH 655

Query: 667 G----GPGSD--------KHPFWLQSCHPDKRLHSQMCEAEAFRATYAVQGREPVYINPL 714
                 PG D         +P  L   H   R HS     +  +        + V+INP+
Sbjct: 656 PLPAYTPGFDGWDDPLRKTYPLQLTGFHYKARTHSSYGNIDVLQQACP----QEVWINPI 711

Query: 715 DAKAKGIKDGDLVRVFNDRGQLLAGAVLSDSYPRGVIRIEEGAWYGPLTEKVGAICTYGD 774
           DA+A+GI+ GD VRVFN+ G++L  A ++     GV  I +GAW     +  G    +G 
Sbjct: 712 DAQARGIRHGDTVRVFNNNGEMLIAAKVTPRILPGVTAIGQGAWL--KADMFGDRVDHGG 769

Query: 775 PNTLTLDLGTSELAQATSANTCIVDFEK 802
              +      S LA+   +++ +V  EK
Sbjct: 770 SINILTSHRPSPLAKGNPSHSNLVQIEK 797